RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 CHEK1O14757 476 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC22A1O15245 554 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 LRRTM2O43300 516 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF208O43345 1280 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ATP6V1G1O75348 118 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 CBR3O75828 277 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 STK17BO94768 372 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TNFSF15O95150 251 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 NDUFB2O95178 105 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 AHSA1O95433 338 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 SYNGR4O95473 234 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 CLIC3O95833 236 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 NUDT14O95848 222 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 C1QCP02747 245 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 SERPINA7P05543 415 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 WNT2P09544 360 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 PIPP12273 146 aaPredicted RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 NR2C1P13056 603 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 CCL4P13236 92 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 IFI30P13284 250 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF3P17036 446 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TCN2P20062 427 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 CCNA2P20248 432 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 CSRP1P21291 193 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 PSMA1P25786 263 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 DCKP27707 260 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ELK4P28324 431 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 GTF2E2P29084 291 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 HTR1FP30939 366 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 EVI2BP34910 448 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 RPL4P36578 427 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 POLR2IP36954 125 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ACAA2P42765 397 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 OMPP47874 163 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ALDH3B2P48448 385 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 SERPINB10P48595 397 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 GSSP48637 474 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 SSR4P51571 173 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 POLR2HP52434 150 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF136P52737 540 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 MFAP2P55001 183 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 LYZP61626 148 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ACTC1P68032 377 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ACTA1P68133 377 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC35A2P78381 396 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 GALK2Q01415 458 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 HSF2Q03933 536 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 RAB40BQ12829 278 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 PPP1R8Q12972 351 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 MRPL28Q13084 256 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 SKP2Q13309 424 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 APOFQ13790 326 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 GINS1Q14691 196 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 PON3Q15166 354 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 MAPK14Q16539 360 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 GLYR1Q49A26 553 aaPredicted RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 NADK2Q4G0N4 442 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 CCNJQ5T5M9 372 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 SYT6Q5T7P8 510 aaPredicted RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 DDI2Q5TDH0 399 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 NXNL2Q5VZ03 156 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 C12orf73Q69YU5 71 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 SMARCD3Q6STE5 483 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ATRAIDQ6UW56 229 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 PAMR1Q6UXH9 720 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TMPRSS11AQ6ZMR5 421 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 DPY19L2P2Q6ZN68 376 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF836Q6ZNA1 936 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF600Q6ZNG1 722 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 DGAT2L6Q6ZPD8 337 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 LINC00299Q6ZSB3 139 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 HDDC2Q7Z4H3 204 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TSEN54Q7Z6J9 526 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TMEM179BQ7Z7N9 219 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 RPS19BP1Q86WX3 136 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 RBM45Q8IUH3 476 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ERI1Q8IV48 349 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 NRMQ8IXM6 262 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 C9orf40Q8IXQ3 194 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 PRSS58Q8IYP2 241 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ENTHD1Q8IYW4 607 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 HS3ST5Q8IZT8 346 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 LINC00518Q8N0U6 118 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 CADM2Q8N3J6 435 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TMEM156Q8N614 296 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 APCDD1LQ8NCL9 501 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 FAM71CQ8NEG0 241 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TMEM185AQ8NFB2 350 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 PROKR2Q8NFJ6 384 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 OR4D11Q8NGI4 311 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 FANK1Q8TC84 345 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 FNDC8Q8TC99 324 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 RAB2BQ8WUD1 216 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 ST8SIA1Q92185 356 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TSLPQ969D9 159 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 EFHD2Q96C19 240 aaPredicted RBP1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 DDIT4LQ96D03 193 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 SGTBQ96EQ0 304 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 TMEM80Q96HE8 168 aa1.91□□□□□ -2.1
TOPBP1-205ENST00000506779 IMMP1LQ96LU5 166 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms