RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 FOXF2Q12947 444 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 OR8B8Q15620 311 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 FBXW9Q5XUX1 488 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 SIGIRRQ6IA17 410 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 VWA1Q6PCB0 445 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 P4HA3Q7Z4N8 544 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 MUC20Q8N307 709 aaPredicted RBP10.54□□□□□ -0.72
LIN54-206ENST00000506560 C9orf106Q8NAJ2 232 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 OR1K1Q8NGR3 316 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 FBXW5Q969U6 566 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 POM121L2Q96KW2 1035 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 PTTG3PQ9NZH4 202 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 IGKV1D-8A0A087WSZ0 117 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 HTR3BO95264 441 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 SFTPBP07988 381 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 TAF9Q16594 264 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 NRN1LQ496H8 165 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 SPATA46Q5T0L3 261 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 PLCXD3Q63HM9 321 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 ZNF626Q68DY1 528 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 NLRC3Q7RTR2 1065 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 MDP1Q86V88 176 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 MICU1Q9BPX6 476 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 C1QTNF6Q9BXI9 259 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 PRDM14Q9GZV8 571 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 FN3KRPQ9HA64 309 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 DLL4Q9NR61 685 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 VSIG4Q9Y279 399 aa10.54□□□□□ -0.72
LIN54-206ENST00000506560 ZZEF1O43149 2961 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 PTPRQQ9UMZ3 2332 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 SHANK1Q9Y566 2161 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 OR2AT4A6NND4 320 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 CEACAM4O75871 244 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 TPOP07202 933 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 ANXA3P12429 323 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 MICBQ29980 383 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 PIGYQ3MUY2 71 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 NKAPLQ5M9Q1 402 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 CLVS2Q5SYC1 327 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 ATPAF1Q5TC12 328 aaPredicted RBP10.53□□□□□ -0.72
LIN54-206ENST00000506560 ZGRF1Q86YA3 2104 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 FAM89BQ8N5H3 189 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 CNEP1R1Q8N9A8 125 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 BCL2L2Q92843 193 aaPredicted RBP10.53□□□□□ -0.72
LIN54-206ENST00000506560 HS3ST6Q96QI5 342 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 IFT46Q9NQC8 304 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 MGAT4CQ9UBM8 478 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 MEIKINA0A087WXM9 373 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 IGHV1-2P23083 117 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 MPGP29372 298 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 ALDH3B1P43353 468 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 CAPZA1P52907 286 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 CXADRP78310 365 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 SSBP1Q04837 148 aaKnown RBP10.53□□□□□ -0.72
LIN54-206ENST00000506560 METTL11BQ5VVY1 283 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 TFAP2EQ6VUC0 442 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 RFPL4BQ6ZWI9 263 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 CDH26Q8IXH8 852 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 SPSB4Q96A44 273 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 BORCS8Q96FH0 119 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 ZNF75AQ96N20 296 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 CST11Q9H112 138 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 PIPOXQ9P0Z9 390 aa10.53□□□□□ -0.72
LIN54-206ENST00000506560 SMG1Q96Q15 3661 aaKnown RBP10.52□□□□□ -0.72
LIN54-206ENST00000506560 CHRM2P08172 466 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 OR3A2P47893 321 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 MECP2P51608 486 aaKnown RBP10.52□□□□□ -0.73
LIN54-206ENST00000506560 ARFRP1Q13795 201 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 RNASE10Q5GAN6 216 aaKnown RBP10.52□□□□□ -0.73
LIN54-206ENST00000506560 FAM209AQ5JX71 171 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 DCAF12L2Q5VW00 463 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 RPRMLQ8N4K4 120 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 HPSE2Q8WWQ2 592 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 S100A13Q99584 98 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 ST6GALNAC5Q9BVH7 336 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 REPIN1Q9BWE0 567 aaKnown RBP10.52□□□□□ -0.73
LIN54-206ENST00000506560 PAPOLGQ9BWT3 736 aaKnown RBP10.52□□□□□ -0.73
LIN54-206ENST00000506560 PECRQ9BY49 303 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 TLN1Q9Y490 2541 aaKnown RBP10.52□□□□□ -0.73
LIN54-206ENST00000506560 ICE1Q9Y2F5 2266 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 F8VVB4 439 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 F8VWA3 439 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 SDCBPO00560 298 aaPredicted RBP10.52□□□□□ -0.73
LIN54-206ENST00000506560 TSC22D2O75157 780 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 ZNF205O95201 554 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 NPBWR2P48146 333 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 RBP2P50120 134 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 SNU13P55769 128 aaKnown RBP10.52□□□□□ -0.73
LIN54-206ENST00000506560 ERVS71-1P61550 626 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 DAZAP2Q15038 168 aaPredicted RBP10.52□□□□□ -0.73
LIN54-206ENST00000506560 C3P1Q6ZMU1 363 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 OR56B1Q8NGI3 324 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 C10orf35Q96D05 121 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 CCDC120Q96HB5 630 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 URM1Q9BTM9 101 aaKnown RBP10.52□□□□□ -0.73
LIN54-206ENST00000506560 ZNF436Q9C0F3 470 aaPredicted RBP10.52□□□□□ -0.73
LIN54-206ENST00000506560 SLC23A1Q9UHI7 598 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 MGAT4AQ9UM21 535 aa10.52□□□□□ -0.73
LIN54-206ENST00000506560 TMEM82A0PJX8 343 aa10.51□□□□□ -0.73
LIN54-206ENST00000506560 FAM221AA4D161 298 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms