RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 OR10Z1Q8NGY1 313 aa11.91□□□□□ -0.5
RNF4-202ENST00000502316 RPL3LQ92901 407 aaKnown RBP11.91□□□□□ -0.5
RNF4-202ENST00000502316 TMEM106AQ96A25 262 aa11.91□□□□□ -0.5
RNF4-202ENST00000502316 SPSB1Q96BD6 273 aa11.91□□□□□ -0.5
RNF4-202ENST00000502316 OPALINQ96PE5 141 aa11.91□□□□□ -0.5
RNF4-202ENST00000502316 MGLLQ99685 303 aa11.91□□□□□ -0.5
RNF4-202ENST00000502316 MTORP42345 2549 aa11.91□□□□□ -0.5
RNF4-202ENST00000502316 SRRM5B3KS81 715 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 WNT9BO14905 357 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 CPEP16870 476 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 ATF1P18846 271 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 PRKACBP22694 351 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 AZGP1P25311 298 aaKnown RBP11.9□□□□□ -0.5
RNF4-202ENST00000502316 MDH2P40926 338 aaKnown RBP11.9□□□□□ -0.5
RNF4-202ENST00000502316 SOX2P48431 317 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 TMEM155Q4W5P6 130 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 UBE2UQ5VVX9 321 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 ZNF573Q86YE8 665 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 MS4A15Q8N5U1 240 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 MAPK1IP1LQ8NDC0 245 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 OR13C9Q8NGT0 318 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 CLDND2Q8NHS1 167 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 AQP3Q92482 292 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 UFD1Q92890 307 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 ZCCHC4Q9H5U6 513 aa11.9□□□□□ -0.5
RNF4-202ENST00000502316 TEP1Q99973 2627 aaKnown RBP11.9□□□□□ -0.51
RNF4-202ENST00000502316 CSPG4Q6UVK1 2322 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 ABCA2Q9BZC7 2435 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 IGKV1-27A0A075B6S5 117 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 PPIAL4EA0A075B759 164 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 TRBV5-7A0A0A0MS05 114 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 hCG_1807616A0A1W2PRN6 198 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 ZNF879B4DU55 563 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 PPIAL4DF5H284 164 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.89□□□□□ -0.51
RNF4-202ENST00000502316 J3QT63 122 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 SULT1B1O43704 296 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 SC5DO75845 299 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 TNFAIP8O95379 198 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 INHBBP09529 407 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 HSMCR30P0CW71 290 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 PPIAL4FP0DN26 164 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 HAAOP46952 286 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 RBP2P50120 134 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 LMO4P61968 165 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 ZNF404Q494X3 552 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 FAM201AQ5SY85 155 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 LIPKQ5VXJ0 399 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 HAGHLQ6PII5 290 aaPredicted RBP11.89□□□□□ -0.51
RNF4-202ENST00000502316 CALHM1Q8IU99 346 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 PHC2Q8IXK0 858 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 MUC20Q8N307 709 aaPredicted RBP11.89□□□□□ -0.51
RNF4-202ENST00000502316 TRMT10AQ8TBZ6 339 aaKnown RBP11.89□□□□□ -0.51
RNF4-202ENST00000502316 NPRL2Q8WTW4 380 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 LRRC29Q8WV35 223 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 FCGR1BQ92637 280 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 THRSPQ92748 146 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 BORCS8Q96FH0 119 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 C1orf159Q96HA4 380 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 OR14A2Q96R54 314 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 PKIBQ9C010 78 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 METTL17Q9H7H0 456 aaPredicted RBP11.89□□□□□ -0.51
RNF4-202ENST00000502316 TMEM165Q9HC07 324 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 PPIAL4AQ9Y536 164 aa11.89□□□□□ -0.51
RNF4-202ENST00000502316 MED13LQ71F56 2210 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 FAM230AA0A1W2PPH8 454 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 LGALS8O00214 317 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 SMAD7O15105 426 aaKnown RBP11.88□□□□□ -0.51
RNF4-202ENST00000502316 NOS1APO75052 506 aaPredicted RBP11.88□□□□□ -0.51
RNF4-202ENST00000502316 GPX5O75715 221 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 RHBDL1O75783 438 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 IGHV2-5P01817 119 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 ACAA1P09110 424 aaPredicted RBP11.88□□□□□ -0.51
RNF4-202ENST00000502316 IGFBP3P17936 291 aaPredicted RBP11.88□□□□□ -0.51
RNF4-202ENST00000502316 EGR1P18146 543 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 FSTP19883 344 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 IL2RGP31785 369 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 HOXA4Q00056 320 aaPredicted RBP11.88□□□□□ -0.51
RNF4-202ENST00000502316 IL24Q13007 206 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 TMEM249Q2WGJ8 235 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 TEX36Q5VZQ5 186 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 CRIP3Q6Q6R5 217 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 UNQ9370/PRO34162Q6UXP9 181 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 LHFPL2Q6ZUX7 228 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 SPICQ8N5J4 248 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 DERL3Q96Q80 235 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 GAL3ST1Q99999 423 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 ZNF696Q9H7X3 374 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 NEK6Q9HC98 313 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 TAS2R4Q9NYW5 299 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 POLDIP2Q9Y2S7 368 aa11.88□□□□□ -0.51
RNF4-202ENST00000502316 NSD1Q96L73 2696 aaPredicted RBP11.87□□□□□ -0.51
RNF4-202ENST00000502316 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.87□□□□□ -0.512e-7■■■■■ 29.5
RNF4-202ENST00000502316 YLPM1P49750 1951 aaKnown RBP11.87□□□□□ -0.51
RNF4-202ENST00000502316 ISPDA4D126 451 aa11.87□□□□□ -0.51
RNF4-202ENST00000502316 OOEPA6NGQ2 149 aa11.87□□□□□ -0.51
RNF4-202ENST00000502316 ZNF205O95201 554 aa11.87□□□□□ -0.51
RNF4-202ENST00000502316 PGA5P0DJD9 388 aa11.87□□□□□ -0.51
RNF4-202ENST00000502316 RAB3AP20336 220 aa11.87□□□□□ -0.51
RNF4-202ENST00000502316 CPT2P23786 658 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms