RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 OR5AC2Q9NZP5 309 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 PCSK5Q92824 1860 aa8.61□□□□□ -1.03
CLIP1-204ENST00000501271 CCDC187A0A096LP49 1063 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 A0A0B4J2A0 478 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 FIGNL2A6NMB9 653 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 F8VVB4 439 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 F8VWA3 439 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 NUPL2O15504 423 aaKnown RBP8.6□□□□□ -1.03
CLIP1-204ENST00000501271 SGCEO43556 437 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 SYNGR3O43761 229 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 ATF4P18848 351 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-204ENST00000501271 PRKACBP22694 351 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 CYCSP99999 105 aaKnown RBP8.6□□□□□ -1.03
CLIP1-204ENST00000501271 Q0VFX4 171 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 RAB35Q15286 201 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 CHRFAM7AQ494W8 412 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 NKAPLQ5M9Q1 402 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 ZNF774Q6NX45 483 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 DRAM2Q6UX65 266 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 GALNTL5Q7Z4T8 443 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 GGNQ86UU5 652 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 UBALD2Q8IYN6 164 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 BPIFCQ8NFQ6 507 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 SEMA6DQ8NFY4 1073 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 OR1S2Q8NGQ3 325 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 LHFPL5Q8TAF8 219 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 RHBDD1Q8TEB9 315 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 INTS12Q96CB8 462 aaKnown RBP8.6□□□□□ -1.03
CLIP1-204ENST00000501271 C10orf35Q96D05 121 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 Q96M66 194 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 NECAB3Q96P71 396 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-204ENST00000501271 SCGB3A2Q96PL1 93 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 LDAHQ9H6V9 325 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 CRLF2Q9HC73 371 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 PRDM6Q9NQX0 595 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 CYTL1Q9NRR1 136 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 ZNF581Q9P0T4 197 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 SHPKQ9UHJ6 478 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 PCDHB10Q9UN67 800 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 DOCK10Q96BY6 2186 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 IGKV1-27A0A075B6S5 117 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 DHRS7CA6NNS2 312 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 SPRY1O43609 319 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-204ENST00000501271 ANGPTL7O43827 346 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 APOC1P02654 83 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 RFPL3SP0C7P2 107 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 PATE4P0C8F1 98 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 B4GALT1P15291 398 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 RAC3P60763 192 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 ZNF273Q14593 569 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 PEAR1Q5VY43 1037 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-204ENST00000501271 GPR137CQ8N3F9 429 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 OR52H1Q8NGJ2 320 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 OR51F2Q8NH61 342 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 OR14L1PQ8NHC6 308 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 IER2Q9BTL4 223 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 SF3B5Q9BWJ5 86 aaKnown RBP8.6□□□□□ -1.03
CLIP1-204ENST00000501271 ASF1BQ9NVP2 202 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 SLC39A1Q9NY26 324 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 ARID1AO14497 2285 aa8.6□□□□□ -1.03
CLIP1-204ENST00000501271 PMS2P1A4D2B8 440 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 GJE1A6NN92 205 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 ZNF716A6NP11 495 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 TRIM77I1YAP6 450 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 PLATP00750 562 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 KNG1P01042 644 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 SERPINA5P05154 406 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 TMEM225BP0DP42 221 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 SRD5A2P31213 254 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 PTGER4P35408 488 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 MTCP1P56278 107 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 PRSS54Q6PEW0 395 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.59□□□□□ -1.03
CLIP1-204ENST00000501271 PPP1R32Q7Z5V6 425 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 SULF2Q8IWU5 870 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 AKR7LQ8NHP1 331 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 EMG1Q92979 244 aaKnown RBP8.59□□□□□ -1.03
CLIP1-204ENST00000501271 REEP6Q96HR9 211 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 CDX2Q99626 313 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-204ENST00000501271 TMEM38BQ9NVV0 291 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 PLEKHJ1Q9NW61 149 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 GLS2Q9UI32 602 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 CELSR3Q9NYQ7 3312 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 FAM230AA0A1W2PPH8 454 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 LRRC3CA6NJW4 275 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 CA11O75493 328 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 P04436 131 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 LYL1P12980 280 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 TPT1P13693 172 aaKnown RBP8.59□□□□□ -1.03
CLIP1-204ENST00000501271 ZNF32P17041 273 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 OTX2P32243 289 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 ARHGDIBP52566 201 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 CHAF1BQ13112 559 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 RAB32Q13637 225 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 TRIM61Q5EBN2 209 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 RPUSD3Q6P087 351 aaKnown RBP8.59□□□□□ -1.03
CLIP1-204ENST00000501271 POC1AQ8NBT0 407 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 SLC30A7Q8NEW0 376 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 OR1F12Q8NHA8 337 aa8.59□□□□□ -1.03
CLIP1-204ENST00000501271 SGCZQ96LD1 299 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms