RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 HAGHLQ6PII5 290 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-213ENST00000498495 SLC36A1Q7Z2H8 476 aa10.66□□□□□ -0.7
HSPG2-213ENST00000498495 C1QL2Q7Z5L3 287 aa10.66□□□□□ -0.7
HSPG2-213ENST00000498495 ZNF573Q86YE8 665 aa10.66□□□□□ -0.7
HSPG2-213ENST00000498495 SYS1Q8N2H4 156 aa10.66□□□□□ -0.7
HSPG2-213ENST00000498495 OR5T2Q8NGG2 359 aa10.66□□□□□ -0.7
HSPG2-213ENST00000498495 CNIH3Q8TBE1 160 aa10.66□□□□□ -0.7
HSPG2-213ENST00000498495 C12orf43Q96C57 262 aaKnown RBP10.66□□□□□ -0.7
HSPG2-213ENST00000498495 SEH1LQ96EE3 360 aa10.66□□□□□ -0.7
HSPG2-213ENST00000498495 PELI1Q96FA3 418 aa10.66□□□□□ -0.7
HSPG2-213ENST00000498495 CCL13Q99616 98 aa10.66□□□□□ -0.7
HSPG2-213ENST00000498495 NUDT16L1Q9BRJ7 211 aaKnown RBP10.66□□□□□ -0.7
HSPG2-213ENST00000498495 WDR13Q9H1Z4 485 aa10.66□□□□□ -0.7
HSPG2-213ENST00000498495 ISG20L2Q9H9L3 353 aaKnown RBP10.66□□□□□ -0.7
HSPG2-213ENST00000498495 SNTG1Q9NSN8 517 aa10.66□□□□□ -0.7
HSPG2-213ENST00000498495 ERVK13-1Q9NX77 482 aa10.66□□□□□ -0.7
HSPG2-213ENST00000498495 KAAG1Q9UBP8 84 aa10.66□□□□□ -0.7
HSPG2-213ENST00000498495 CTSZQ9UBR2 303 aa10.66□□□□□ -0.7
HSPG2-213ENST00000498495 OPN4Q9UHM6 478 aa10.66□□□□□ -0.7
HSPG2-213ENST00000498495 NAV3Q8IVL0 2385 aa10.65□□□□□ -0.7
HSPG2-213ENST00000498495 IGHV2-70DA0A0C4DH43 119 aa10.65□□□□□ -0.7
HSPG2-213ENST00000498495 IRGMA1A4Y4 181 aa10.65□□□□□ -0.7
HSPG2-213ENST00000498495 H0YAE9 185 aa10.65□□□□□ -0.7
HSPG2-213ENST00000498495 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.65□□□□□ -0.7
HSPG2-213ENST00000498495 DVL1O14640 695 aa10.65□□□□□ -0.7
HSPG2-213ENST00000498495 ISG15P05161 165 aa10.65□□□□□ -0.7
HSPG2-213ENST00000498495 HAAOP46952 286 aa10.65□□□□□ -0.7
HSPG2-213ENST00000498495 NANOS3P60323 173 aaKnown RBP10.65□□□□□ -0.7
HSPG2-213ENST00000498495 PAX2Q02962 417 aa10.65□□□□□ -0.7
HSPG2-213ENST00000498495 MRPL28Q13084 256 aaKnown RBP10.65□□□□□ -0.7
HSPG2-213ENST00000498495 ALKBH1Q13686 389 aaKnown RBP10.65□□□□□ -0.7
HSPG2-213ENST00000498495 AQP3Q92482 292 aa10.65□□□□□ -0.7
HSPG2-213ENST00000498495 RNF166Q96A37 237 aaPredicted RBP10.65□□□□□ -0.7
HSPG2-213ENST00000498495 TMIGD2Q96BF3 282 aa10.65□□□□□ -0.7
HSPG2-213ENST00000498495 C10orf35Q96D05 121 aa10.65□□□□□ -0.7
HSPG2-213ENST00000498495 FGF20Q9NP95 211 aaPredicted RBP10.65□□□□□ -0.7
HSPG2-213ENST00000498495 HSPE1-MOB4S4R3N1 261 aa10.65□□□□□ -0.7
HSPG2-213ENST00000498495 LOC107986453A0A1B0GWG9 222 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 FAM230AA0A1W2PPH8 454 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 PQLC2LA1A4F0 135 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 NDUFB3O43676 98 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 TCF21O43680 179 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 GATBO75879 557 aaKnown RBP10.64□□□□□ -0.71
HSPG2-213ENST00000498495 LIPFP07098 398 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 DCKP27707 260 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 CAPGP40121 348 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 FUT6P51993 359 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 GBX2P52951 348 aaPredicted RBP10.64□□□□□ -0.71
HSPG2-213ENST00000498495 UBE2V2Q15819 145 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 ARMCX4Q5H9R4 360 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 ATPAF1Q5TC12 328 aaPredicted RBP10.64□□□□□ -0.71
HSPG2-213ENST00000498495 C8orf59Q8N0T1 100 aaPredicted RBP10.64□□□□□ -0.71
HSPG2-213ENST00000498495 ZNF676Q8N7Q3 588 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 TRMT10AQ8TBZ6 339 aaKnown RBP10.64□□□□□ -0.71
HSPG2-213ENST00000498495 FGGYQ96C11 551 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 MDFIQ99750 246 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 ZNF649Q9BS31 505 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 RASL12Q9NYN1 266 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 NLKQ9UBE8 527 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 NKX1-2Q9UD57 310 aaPredicted RBP10.64□□□□□ -0.71
HSPG2-213ENST00000498495 HHLA2Q9UM44 414 aa10.64□□□□□ -0.71
HSPG2-213ENST00000498495 OR4C45A6NMZ5 311 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 OR2AT4A6NND4 320 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 RNF212BA8MTL3 300 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 SYNGR1O43759 233 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 ENSAO43768 121 aaKnown RBP10.63□□□□□ -0.71
HSPG2-213ENST00000498495 ECDO95905 644 aaPredicted RBP10.63□□□□□ -0.71
HSPG2-213ENST00000498495 RPSAP08865 295 aaKnown RBP10.63□□□□□ -0.71
HSPG2-213ENST00000498495 ZNF20P17024 532 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 EPHA1P21709 976 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 FPR2P25090 351 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 GABRA2P47869 451 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 TGM4P49221 684 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 IKZF1Q13422 519 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 MED21Q13503 144 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 CNN3Q15417 329 aaKnown RBP10.63□□□□□ -0.71
HSPG2-213ENST00000498495 C11orf91Q3C1V1 193 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 LRRC10Q5BKY1 277 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 TMPRSS11AQ6ZMR5 421 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 BTN2A1Q7KYR7 527 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 PNLDC1Q8NA58 520 aaKnown RBP10.63□□□□□ -0.71
HSPG2-213ENST00000498495 HAVCR2Q8TDQ0 301 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 ZNF418Q8TF45 676 aaPredicted RBP10.63□□□□□ -0.71
HSPG2-213ENST00000498495 NPRL2Q8WTW4 380 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 PP6455Q8WZ26 134 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 TMEM158Q8WZ71 300 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 ST8SIA4Q92187 359 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 BORCS8Q96FH0 119 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 TMEM80Q96HE8 168 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 MED30Q96HR3 178 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 CHST5Q9GZS9 411 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 DNTTIP1Q9H147 329 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 SMURF1Q9HCE7 757 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 CHCHD3Q9NX63 227 aaKnown RBP10.63□□□□□ -0.71
HSPG2-213ENST00000498495 POLDIP2Q9Y2S7 368 aa10.63□□□□□ -0.71
HSPG2-213ENST00000498495 TRBV2A0A0J9YWF9 115 aa10.62□□□□□ -0.71
HSPG2-213ENST00000498495 NKX6-3A6NJ46 265 aa10.62□□□□□ -0.71
HSPG2-213ENST00000498495 C22orf46C9J442 243 aa10.62□□□□□ -0.71
HSPG2-213ENST00000498495 H0YHG0 523 aa10.62□□□□□ -0.71
HSPG2-213ENST00000498495 J3QT63 122 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms