RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 LRP12Q9Y561 859 aa9.36□□□□□ -0.91
CDK9-205ENST00000498339 HILPDAQ9Y5L2 63 aa9.36□□□□□ -0.91
CDK9-205ENST00000498339 DHRS12A0PJE2 317 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 FAM90A8PA6NJQ4 464 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 ZNF593O00488 134 aaPredicted RBP9.35□□□□□ -0.91
CDK9-205ENST00000498339 GYPBP06028 91 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 LPLP06858 475 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 NCK1P16333 377 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 JUNBP17275 347 aaPredicted RBP9.35□□□□□ -0.91
CDK9-205ENST00000498339 DGCR2P98153 550 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 SF3A3Q12874 501 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDK9-205ENST00000498339 ZNF273Q14593 569 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 SMIM21Q3B7S5 101 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 KLHL12Q53G59 568 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 KCTD18Q6PI47 426 aaPredicted RBP9.35□□□□□ -0.91
CDK9-205ENST00000498339 MRPL41Q8IXM3 137 aaKnown RBP9.35□□□□□ -0.91
CDK9-205ENST00000498339 LINC00471Q8N535 108 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 ZNF511Q8NB15 262 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 ZNF671Q8TAW3 534 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 NDNFQ8TB73 568 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 FAM81AQ8TBF8 368 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 ZNRF4Q8WWF5 429 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 HPSE2Q8WWQ2 592 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 RCN3Q96D15 328 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 SDSLQ96GA7 329 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 AKR1E2Q96JD6 320 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 ASCL2Q99929 193 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 ZNF222Q9UK12 451 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 V9GYQ6 96 aa9.35□□□□□ -0.91
CDK9-205ENST00000498339 MEX3AA1L020 520 aaKnown RBP9.34□□□□□ -0.91
CDK9-205ENST00000498339 RFPL4AA6NLU0 287 aa9.34□□□□□ -0.91
CDK9-205ENST00000498339 ZNF732B4DXR9 585 aa9.34□□□□□ -0.91
CDK9-205ENST00000498339 RFPL4AL1F8VTS6 287 aa9.34□□□□□ -0.91
CDK9-205ENST00000498339 GADD45GO95257 159 aa9.34□□□□□ -0.91
CDK9-205ENST00000498339 IFNGR2P38484 337 aa9.34□□□□□ -0.91
CDK9-205ENST00000498339 CEBPDP49716 269 aaPredicted RBP9.34□□□□□ -0.91
CDK9-205ENST00000498339 CBX1P83916 185 aa9.34□□□□□ -0.91
CDK9-205ENST00000498339 CEP78Q5JTW2 689 aa9.34□□□□□ -0.91
CDK9-205ENST00000498339 CASC10Q5T4H9 136 aa9.34□□□□□ -0.91
CDK9-205ENST00000498339 ZNF561Q8N587 486 aa9.34□□□□□ -0.91
CDK9-205ENST00000498339 OR6N2Q8NGY6 317 aa9.34□□□□□ -0.91
CDK9-205ENST00000498339 MUC7Q8TAX7 377 aa9.34□□□□□ -0.91
CDK9-205ENST00000498339 FGF23Q9GZV9 251 aaPredicted RBP9.34□□□□□ -0.91
CDK9-205ENST00000498339 RGCCQ9H4X1 137 aa9.34□□□□□ -0.91
CDK9-205ENST00000498339 EGLN3Q9H6Z9 239 aa9.34□□□□□ -0.91
CDK9-205ENST00000498339 PALMDQ9NP74 551 aa9.34□□□□□ -0.91
CDK9-205ENST00000498339 NUDT19A8MXV4 375 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 ODF3BA8MYP8 253 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 H0YHG0 523 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 SLC22A2O15244 555 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 CST4P01036 141 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 H2BFMP0C1H6 154 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 ACKR3P25106 362 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 DCTDP32321 178 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 NUDT2P50583 147 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 RAB25P57735 213 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 SMIM11AP58511 58 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 GNG3P63215 75 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 ABCA11PQ4W5N1 156 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 C9orf152Q5JTZ5 239 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 ZNF626Q68DY1 528 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 HAGHLQ6PII5 290 aaPredicted RBP9.33□□□□□ -0.92
CDK9-205ENST00000498339 C10orf99Q6UWK7 81 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 COMMD2Q86X83 199 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 ERI1Q8IV48 349 aaKnown RBP9.33□□□□□ -0.92
CDK9-205ENST00000498339 C11orf42Q8N5U0 333 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 SLC37A3Q8NCC5 494 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 BCAS4Q8TDM0 211 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 LYZL4Q96KX0 146 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 KCTD14Q9BQ13 255 aaPredicted RBP9.33□□□□□ -0.92
CDK9-205ENST00000498339 ZNF319Q9P2F9 582 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 OR14J1Q9UGF5 321 aa9.33□□□□□ -0.92
CDK9-205ENST00000498339 NME4O00746 187 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 EDF1O60869 148 aaKnown RBP9.32□□□□□ -0.92
CDK9-205ENST00000498339 MTRF1O75570 445 aaKnown RBP9.32□□□□□ -0.92
CDK9-205ENST00000498339 CLUP10909 449 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 DYNLT3P51808 116 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 EDDM3BP56851 147 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 CRMP1Q14194 572 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 FAM76BQ5HYJ3 339 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 LDLRAD2Q5SZI1 272 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 ETV3LQ6ZN32 361 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 ACP7Q6ZNF0 438 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 C16orf82Q7Z2V1 217 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.32□□□□□ -0.92
CDK9-205ENST00000498339 SLC15A3Q8IY34 581 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 BATF2Q8N1L9 274 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 CD177Q8N6Q3 437 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 ASCC1Q8N9N2 400 aaKnown RBP9.32□□□□□ -0.92
CDK9-205ENST00000498339 Q8NFD4 153 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 GNPDA2Q8TDQ7 276 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 DHRS1Q96LJ7 313 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 ZNF488Q96MN9 340 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 PRR25Q96S07 402 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 INTS14Q96SY0 518 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 OR51I2Q9H344 312 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 TBC1D23Q9NUY8 699 aa9.32□□□□□ -0.92
CDK9-205ENST00000498339 GAR1Q9NY12 217 aaKnown RBP9.32□□□□□ -0.92
CDK9-205ENST00000498339 SAMD4AQ9UPU9 718 aaKnown RBP9.32□□□□□ -0.92
CDK9-205ENST00000498339 CDH10Q9Y6N8 788 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms