RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 CD80P33681 288 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 KIR3DL2P43630 455 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 NPY4RP50391 375 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 GPM6AP51674 278 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 NANOS3P60323 173 aaKnown RBP13.71□□□□□ -0.21
SF3A1-209ENST00000496189 HNRNPA0Q13151 305 aaKnown RBP13.71□□□□□ -0.21
SF3A1-209ENST00000496189 CEP78Q5JTW2 689 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 FAM201AQ5SY85 155 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 SFRP4Q6FHJ7 346 aaPredicted RBP13.71□□□□□ -0.21
SF3A1-209ENST00000496189 BTNL3Q6UXE8 466 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 Q6ZSR3 168 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 ZNF826PQ6ZT77 177 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 KRT74Q7RTS7 529 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 OR5A2Q8NGI9 324 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 OR14K1Q8NGZ2 314 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 C10orf35Q96D05 121 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 MRI1Q9BV20 369 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 CLEC2DQ9UHP7 191 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 HHLA2Q9UM44 414 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 PCDHGB5Q9Y5G0 923 aa13.71□□□□□ -0.21
SF3A1-209ENST00000496189 OR4C45A6NMZ5 311 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 A8MXK9 166 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 ZNF732B4DXR9 585 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 ADAM20O43506 726 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 GATBO75879 557 aaKnown RBP13.7□□□□□ -0.22
SF3A1-209ENST00000496189 C21orf33P30042 268 aaPredicted RBP13.7□□□□□ -0.22
SF3A1-209ENST00000496189 RBMXP38159 391 aaKnown RBP13.7□□□□□ -0.22
SF3A1-209ENST00000496189 TAS2R43P59537 309 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 OR2G6Q5TZ20 316 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 RNLSQ5VYX0 342 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 WDR82Q6UXN9 313 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 GCSAMQ8N6F7 178 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 C19orf18Q8NEA5 215 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 OR10Z1Q8NGY1 313 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 OR5AK2Q8NH90 309 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 ZNF671Q8TAW3 534 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 GATAD2BQ8WXI9 593 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 RNF166Q96A37 237 aaPredicted RBP13.7□□□□□ -0.22
SF3A1-209ENST00000496189 TECTBQ96PL2 329 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 MND1Q9BWT6 205 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 TLNRD1Q9H1K6 362 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 C7orf69Q9H7B7 122 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 METRNQ9UJH8 293 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 SLC7A11Q9UPY5 501 aa13.7□□□□□ -0.22
SF3A1-209ENST00000496189 ABCA2Q9BZC7 2435 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 PHF1O43189 567 aaPredicted RBP13.69□□□□□ -0.22
SF3A1-209ENST00000496189 RGS10O43665 173 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 ZNF20P17024 532 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 CRHBPP24387 322 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 THBS2P35442 1172 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 CFHR2P36980 270 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 SLC35A2P78381 396 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 CD276Q5ZPR3 534 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 SLC36A1Q7Z2H8 476 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 ZNF573Q86YE8 665 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 RDH10Q8IZV5 341 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 SCCPDHQ8NBX0 429 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 OR13C3Q8NGS6 347 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 HPSE2Q8WWQ2 592 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 C12orf43Q96C57 262 aaKnown RBP13.69□□□□□ -0.22
SF3A1-209ENST00000496189 CDCA4Q9BXL8 241 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 DUSP21Q9H596 190 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 POLR3KQ9Y2Y1 108 aaPredicted RBP13.69□□□□□ -0.22
SF3A1-209ENST00000496189 NAV3Q8IVL0 2385 aa13.69□□□□□ -0.22
SF3A1-209ENST00000496189 ANKRD61A6NGH8 418 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 NKX6-3A6NJ46 265 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 E9PI62 339 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 H3BSH0 61 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 ZFPL1O95159 310 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 LHBP01229 141 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 OCM2P0CE71 109 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 OCMP0CE72 109 aaPredicted RBP13.68□□□□□ -0.22
SF3A1-209ENST00000496189 EEF1B2P24534 225 aaKnown RBP13.68□□□□□ -0.22
SF3A1-209ENST00000496189 ZFP36P26651 326 aaKnown RBP13.68□□□□□ -0.22
SF3A1-209ENST00000496189 WNT4P56705 351 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 SEC61A1P61619 476 aaKnown RBP13.68□□□□□ -0.22
SF3A1-209ENST00000496189 TEX36Q5VZQ5 186 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 WDR86Q86TI4 376 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 PRIMA1Q86XR5 153 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 NANOGP1Q8N7R0 232 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 NANPQ8TBE9 248 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 PP6455Q8WZ26 134 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 RPL3LQ92901 407 aaKnown RBP13.68□□□□□ -0.22
SF3A1-209ENST00000496189 CCDC90BQ9GZT6 254 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 METTL17Q9H7H0 456 aaPredicted RBP13.68□□□□□ -0.22
SF3A1-209ENST00000496189 PPP1R3EQ9H7J1 279 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 NEK6Q9HC98 313 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 GPR173Q9NS66 373 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 POLDIP2Q9Y2S7 368 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 AUP1Q9Y679 476 aa13.68□□□□□ -0.22
SF3A1-209ENST00000496189 SRRM5B3KS81 715 aa13.67□□□□□ -0.22
SF3A1-209ENST00000496189 TMPRSS2O15393 492 aa13.67□□□□□ -0.22
SF3A1-209ENST00000496189 OGG1O15527 345 aa13.67□□□□□ -0.22
SF3A1-209ENST00000496189 GYPAP02724 150 aa13.67□□□□□ -0.22
SF3A1-209ENST00000496189 GLRA1P23415 457 aa13.67□□□□□ -0.22
SF3A1-209ENST00000496189 GTF2A1P52655 376 aaPredicted RBP13.67□□□□□ -0.22
SF3A1-209ENST00000496189 GMFBP60983 142 aa13.67□□□□□ -0.22
SF3A1-209ENST00000496189 CDK5R1Q15078 307 aa13.67□□□□□ -0.22
SF3A1-209ENST00000496189 CNN3Q15417 329 aaKnown RBP13.67□□□□□ -0.22
SF3A1-209ENST00000496189 ARMCX4Q5H9R4 360 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms