RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 LRP5LA4QPB2 252 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 DPPA5A6NC42 116 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 HPXP02790 462 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 TNFRSF1AP19438 455 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 SDC2P34741 201 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 MPPED2Q15777 294 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 CRIP3Q6Q6R5 217 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 ZNF573Q86YE8 665 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 NEU4Q8WWR8 484 aaPredicted RBP16.48■□□□□ 0.23
ATG3-208ENST00000495756 BCL7BQ9BQE9 202 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 RBM38Q9H0Z9 239 aaKnown RBP16.48■□□□□ 0.23
ATG3-208ENST00000495756 AK6Q9Y3D8 172 aaKnown RBP16.48■□□□□ 0.23
ATG3-208ENST00000495756 CHD3Q12873 2000 aaKnown RBP16.48■□□□□ 0.23
ATG3-208ENST00000495756 ZNF93P35789 620 aaPredicted RBP16.48■□□□□ 0.23
ATG3-208ENST00000495756 HAAOP46952 286 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 TPRA1Q86W33 373 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 ANGPTL5Q86XS5 388 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 CALHM1Q8IU99 346 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 CDH26Q8IXH8 852 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 SCCPDHQ8NBX0 429 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 ZNF420Q8TAQ5 688 aaPredicted RBP16.48■□□□□ 0.23
ATG3-208ENST00000495756 ISOC1Q96CN7 298 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 CPNE2Q96FN4 548 aaPredicted RBP16.48■□□□□ 0.23
ATG3-208ENST00000495756 GFI1Q99684 422 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 TLNRD1Q9H1K6 362 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 GCM1Q9NP62 436 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 UFSP2Q9NUQ7 469 aa16.48■□□□□ 0.23
ATG3-208ENST00000495756 ZNF701Q9NV72 531 aaPredicted RBP16.48■□□□□ 0.23
ATG3-208ENST00000495756 SMIM31A0A1B0GVY4 71 aa16.47■□□□□ 0.23
ATG3-208ENST00000495756 TRIM64BA6NI03 449 aa16.47■□□□□ 0.23
ATG3-208ENST00000495756 PDCD5O14737 125 aa16.47■□□□□ 0.23
ATG3-208ENST00000495756 NOL3O60936 208 aaKnown RBP16.47■□□□□ 0.23
ATG3-208ENST00000495756 HAGHLQ6PII5 290 aaPredicted RBP16.47■□□□□ 0.23
ATG3-208ENST00000495756 MOGAT3Q86VF5 341 aa16.47■□□□□ 0.23
ATG3-208ENST00000495756 LYPD6Q86Y78 171 aa16.47■□□□□ 0.23
ATG3-208ENST00000495756 C11orf53Q8IXP5 236 aa16.47■□□□□ 0.23
ATG3-208ENST00000495756 JAGN1Q8N5M9 183 aa16.47■□□□□ 0.23
ATG3-208ENST00000495756 ERGIC1Q969X5 290 aa16.47■□□□□ 0.23
ATG3-208ENST00000495756 RFT1Q96AA3 541 aa16.47■□□□□ 0.23
ATG3-208ENST00000495756 GPER1Q99527 375 aa16.47■□□□□ 0.23
ATG3-208ENST00000495756 NKX3-1Q99801 234 aaPredicted RBP16.47■□□□□ 0.23
ATG3-208ENST00000495756 METTL17Q9H7H0 456 aaPredicted RBP16.47■□□□□ 0.23
ATG3-208ENST00000495756 A6NLC8 198 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 CDIPTO14735 213 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 NDUFS7O75251 213 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 CDRT1O95170 752 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 F12P00748 615 aaPredicted RBP16.46■□□□□ 0.23
ATG3-208ENST00000495756 CD37P11049 281 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 RAB3BP20337 219 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 PSMD7P51665 324 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 EFNA4P52798 201 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 OR10A3P58181 314 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 MXD1Q05195 221 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 GLT8D1Q68CQ7 371 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 AQP3Q92482 292 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 FOXRED1Q96CU9 486 aaPredicted RBP16.46■□□□□ 0.23
ATG3-208ENST00000495756 LURAP1Q96LR2 239 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 FN3KRPQ9HA64 309 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 C1orf123Q9NWV4 160 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 PPP1R3CQ9UQK1 317 aa16.46■□□□□ 0.23
ATG3-208ENST00000495756 IGHV1-69-2A0A0G2JMI3 117 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 CCDC160A6NGH7 325 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 H3BMQ9 156 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 J3QT63 122 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 LY6HO94772 140 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 PLATP00750 562 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 PAX1P15863 534 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 MPZP25189 248 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 PMELP40967 661 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 SERPINB10P48595 397 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 PDZK1IP1Q13113 114 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 ZNF826PQ6ZT77 177 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 NR2C2APQ86WQ0 139 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 OR5D18Q8NGL1 313 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 UQCC2Q9BRT2 126 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 PKIBQ9C010 78 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 NDUFA13Q9P0J0 144 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 V9GY05 133 aa16.45■□□□□ 0.22
ATG3-208ENST00000495756 ARID1AO14497 2285 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 SMIM30A4D0T7 59 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 SLC22A1O15245 554 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 CDC14BO60729 498 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 IGHV4-39P01824 125 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 CLEC2LP0C7M8 214 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 DNASE1P24855 282 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 RPS19P39019 145 aaKnown RBP16.44■□□□□ 0.22
ATG3-208ENST00000495756 OR3A4PP47883 348 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 POU3F4P49335 361 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 ZP1P60852 638 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 MRPS11P82912 194 aaKnown RBP16.44■□□□□ 0.22
ATG3-208ENST00000495756 WDR82Q6UXN9 313 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 USP43Q70EL4 1123 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 SLC25A26Q70HW3 274 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 TGIF2LYQ8IUE0 185 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 PNLDC1Q8NA58 520 aaKnown RBP16.44■□□□□ 0.22
ATG3-208ENST00000495756 NDNFQ8TB73 568 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 Q8TCH9 128 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 CNTD2Q9H8S5 307 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 TREM2Q9NZC2 230 aa16.44■□□□□ 0.22
ATG3-208ENST00000495756 RSL24D1Q9UHA3 163 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms