RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 PLBD1Q6P4A8 553 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 HAGHLQ6PII5 290 aaPredicted RBP7.84□□□□□ -1.15
UBR4-216ENST00000494503 Q6ZPA2 131 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 MOB3CQ70IA8 216 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 TMEM219Q86XT9 240 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 OR10G2Q8NGC3 310 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 OR8B12Q8NGG6 310 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 ZNF671Q8TAW3 534 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 HPSE2Q8WWQ2 592 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 DMRTB1Q96MA1 342 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 TTTY10Q9BZA0 68 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 NMNAT2Q9BZQ4 307 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 MYLK2Q9H1R3 596 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 NIPAL2Q9H841 368 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 HEXA-AS1Q9H8Q6 139 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 CMC2Q9NRP2 79 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 OR14J1Q9UGF5 321 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 LAMP5Q9UJQ1 280 aa7.84□□□□□ -1.15
UBR4-216ENST00000494503 IGKV1D-17A0A075B6S4 117 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 RFPL4AA6NLU0 287 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 RFPL4AL1F8VTS6 287 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 CHST1O43916 411 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 CST4P01036 141 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 ARG1P05089 322 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 CD28P10747 220 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 CCL3L1P16619 93 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 ATP6V1B2P21281 511 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 MAP2K3P46734 347 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 CEBPDP49716 269 aaPredicted RBP7.83□□□□□ -1.16
UBR4-216ENST00000494503 RAB13P51153 203 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 PSMA6P60900 246 aaKnown RBP7.83□□□□□ -1.16
UBR4-216ENST00000494503 DYNC1I2Q13409 638 aaKnown RBP7.83□□□□□ -1.16
UBR4-216ENST00000494503 MICAQ29983 383 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 SMIM21Q3B7S5 101 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 LINC01590Q5TEZ4 76 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 OR2T5Q6IEZ7 315 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 PRSS45Q7RTY3 260 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 DTX3Q8N9I9 347 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 OR4F17Q8NGA8 305 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 OR2T29Q8NH02 315 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 OR2T27Q8NH04 317 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 PPP1R14AQ96A00 147 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 LYZL4Q96KX0 146 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 ZNF488Q96MN9 340 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 OR4F4Q96R69 305 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 NIPSNAP1Q9BPW8 284 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 FGF23Q9GZV9 251 aaPredicted RBP7.83□□□□□ -1.16
UBR4-216ENST00000494503 MMP28Q9H239 520 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 RANBP3Q9H6Z4 567 aaPredicted RBP7.83□□□□□ -1.16
UBR4-216ENST00000494503 NDE1Q9NXR1 346 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 TAGLN3Q9UI15 199 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 LRP12Q9Y561 859 aa7.83□□□□□ -1.16
UBR4-216ENST00000494503 GNGT2O14610 69 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 NXPH2O95156 264 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 MRPL3P09001 348 aaKnown RBP7.82□□□□□ -1.16
UBR4-216ENST00000494503 FAHP16930 419 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 CD33P20138 364 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 LOXL3P58215 753 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 ERVFRD-1P60508 538 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 EMX1Q04741 257 aaPredicted RBP7.82□□□□□ -1.16
UBR4-216ENST00000494503 SSX2Q16385 188 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 CEACAM21Q3KPI0 293 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 FAM98BQ52LJ0 330 aaKnown RBP7.82□□□□□ -1.16
UBR4-216ENST00000494503 ZNF684Q5T5D7 378 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 ZNF770Q6IQ21 691 aaPredicted RBP7.82□□□□□ -1.16
UBR4-216ENST00000494503 HCP5Q6MZN7 132 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 LIAT1Q6ZQX7 453 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 LHFPL4Q7Z7J7 247 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 ZNF454Q8N9F8 522 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 ASCC1Q8N9N2 400 aaKnown RBP7.82□□□□□ -1.16
UBR4-216ENST00000494503 OTOSQ8NHW6 89 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 LRGUKQ96M69 825 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 CITED2Q99967 270 aaPredicted RBP7.82□□□□□ -1.16
UBR4-216ENST00000494503 DGCR6LQ9BY27 220 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 ARL8BQ9NVJ2 186 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 NECAP2Q9NVZ3 263 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 ZNF446Q9NWS9 450 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 VNN3Q9NY84 501 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 USE1Q9NZ43 259 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 IKZF2Q9UKS7 526 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 PIGLQ9Y2B2 252 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 KLHDC2Q9Y2U9 406 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 ZNF281Q9Y2X9 895 aa7.82□□□□□ -1.16
UBR4-216ENST00000494503 TMEM269A0A1B0GVZ9 245 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 OR5B21A6NL26 309 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 F2RL2O00254 374 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 E2F6O75461 281 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 INMTO95050 263 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 MPIG6BO95866 241 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 PF4V1P10720 104 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 PRDX2P32119 198 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 DCTDP32321 178 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 HAAOP46952 286 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 HMGA2P52926 109 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 HCCSP53701 268 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 EDDM3BP56851 147 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 RIPPLY1Q0D2K3 151 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 ZNF273Q14593 569 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 GINS1Q14691 196 aa7.81□□□□□ -1.16
UBR4-216ENST00000494503 CNN3Q15417 329 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms