RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 CGGBP1Q9UFW8 167 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 STEAP1Q9UHE8 339 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 RABL2BQ9UNT1 228 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 SPEF1Q9Y4P9 236 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 CADP27708 2225 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 A0A0A6YYJ9 748 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 A0A0B4J203 849 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 ANKRD34BA5PLL1 514 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 THBDP07204 575 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 RAC2P15153 192 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 HTR2CP28335 458 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 ZNF93P35789 620 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 SRP9P49458 86 aaKnown RBP12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 CLDN12P56749 244 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 CNN3Q15417 329 aaKnown RBP12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 CDSNQ15517 529 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 RAB11BQ15907 218 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 C1orf100Q5SVJ3 147 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 C6orf183Q5T699 404 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 FAM166AQ6J272 317 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 LYPD6Q86Y78 171 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 CDH26Q8IXH8 852 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 TOMM5Q8N4H5 51 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 PIGCQ92535 297 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 CMBLQ96DG6 245 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 WFIKKN1Q96NZ8 548 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 TECTBQ96PL2 329 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 UQCC2Q9BRT2 126 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 PAPOLGQ9BWT3 736 aaKnown RBP12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 NGBQ9NPG2 151 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 GPR173Q9NS66 373 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 RHBDD3Q9Y3P4 386 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 FLNCQ14315 2725 aa12.1□□□□□ -0.47
PDZRN3-210ENST00000492909 MYO18BQ8IUG5 2567 aa12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 RNF224P0DH78 156 aa12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 CALCBP10092 127 aa12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 PRF1P14222 555 aa12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 PTAFRP25105 342 aa12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 CD40P25942 277 aa12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 DMRTC1Q5HYR2 192 aa12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 UBE2NLQ5JXB2 153 aa12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 KRT74Q7RTS7 529 aa12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 LGALS14Q8TCE9 139 aa12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 KLF14Q8TD94 323 aaPredicted RBP12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 NPRL2Q8WTW4 380 aa12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 PIGTQ969N2 578 aa12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 SPSB1Q96BD6 273 aa12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 MARS2Q96GW9 593 aaKnown RBP12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 NKX3-1Q99801 234 aaPredicted RBP12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 NDRG3Q9UGV2 375 aa12.09□□□□□ -0.47
PDZRN3-210ENST00000492909 HCFC1P51610 2035 aa12.08□□□□□ -0.47
PDZRN3-210ENST00000492909 GCN1Q92616 2671 aaKnown RBP12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 HELZ2Q9BYK8 2649 aaKnown RBP12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 ZNF780AO75290 641 aaPredicted RBP12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 CST4P01036 141 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 TCRBP04435 133 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 CD3GP09693 182 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 SELEP16581 610 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 PRKACBP22694 351 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 SCAND1P57086 179 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 DGCR2P98153 550 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 SORDQ00796 357 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 OR2T2Q6IF00 324 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 BHLHE23Q8NDY6 225 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 SSC4DQ8WTU2 575 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 HAVCR1Q96D42 359 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 SPACA5Q96QH8 159 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 GPER1Q99527 375 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 MED28Q9H204 178 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 GHITMQ9H3K2 345 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 CNTD2Q9H8S5 307 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 COPZ2Q9P299 210 aa12.08□□□□□ -0.48
PDZRN3-210ENST00000492909 ANKRD30BLA7E2S9 258 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 ZNF850A8MQ14 1090 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 ZG16O60844 167 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 AGAP20933 346 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 CAPZA1P52907 286 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 SNTB2Q13425 540 aaKnown RBP12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 DYRK1AQ13627 763 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 FCN2Q15485 313 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 KISS1Q15726 138 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 ZNF718Q3SXZ3 478 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 PLCXD3Q63HM9 321 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 MOB3CQ70IA8 216 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 ZNF808Q8N4W9 903 aaPredicted RBP12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 PNLDC1Q8NA58 520 aaKnown RBP12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 OR51D1Q8NGF3 324 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 DEDD2Q8WXF8 326 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 FAM3DQ96BQ1 224 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 CPNE2Q96FN4 548 aaPredicted RBP12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 RADILQ96JH8 1075 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 HYLS1Q96M11 299 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 OR5V1Q9UGF6 321 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 SLC7A11Q9UPY5 501 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 ETV7Q9Y603 341 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 FASNP49327 2511 aaKnown RBP12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 COL12A1Q99715 3063 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 TRAV6A0A075B6T7 132 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 ATP6V1G2-DDX39BF2Z307 99 aa12.07□□□□□ -0.48
PDZRN3-210ENST00000492909 GRNP28799 593 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms