RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 SDSLQ96GA7 329 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 GAFA1Q96PS6 74 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 OR8B4Q96RC9 309 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 CNN2Q99439 309 aaKnown RBP10.23□□□□□ -0.77
COL6A1-205ENST00000492851 C16orf95Q9H693 158 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 ZNRD1Q9P1U0 126 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 NUFIP1Q9UHK0 495 aaKnown RBP10.23□□□□□ -0.77
COL6A1-205ENST00000492851 VPREB3Q9UKI3 123 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 POMPQ9Y244 141 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 DOCK11Q5JSL3 2073 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 PKD1L1Q8TDX9 2849 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 A0A1B0GW55 424 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 MEIOCA2RUB1 952 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 H0YAE9 185 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 RNASEK-C17orf49H0YIS7 233 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 DLGAP1O14490 977 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 DHRS3O75911 302 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 NRASP01111 189 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 IGLV3-1P01715 115 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 DUX4L2P0CJ85 424 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 DUX4L3P0CJ86 424 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 DUX4L4P0CJ87 422 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 DUX4L5P0CJ88 424 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 DUX4L6P0CJ89 424 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 DUX4L7P0CJ90 424 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 PSG2P11465 335 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 RASSF2P50749 326 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 HCCSP53701 268 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 EGR3Q06889 387 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 SMIM21Q3B7S5 101 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 MIDNQ504T8 468 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 DHRS7BQ6IAN0 325 aaPredicted RBP10.22□□□□□ -0.77
COL6A1-205ENST00000492851 FAHD1Q6P587 224 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 DUX4L9Q6RFH8 374 aaPredicted RBP10.22□□□□□ -0.77
COL6A1-205ENST00000492851 MEPCEQ7L2J0 689 aaKnown RBP10.22□□□□□ -0.77
COL6A1-205ENST00000492851 HS3ST5Q8IZT8 346 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 Q8N7P7 452 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 BBS1Q8NFJ9 593 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 OR5K1Q8NHB7 308 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 OR51E1Q8TCB6 317 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 AQP3Q92482 292 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 TAF15Q92804 592 aaKnown RBP eCLIP10.22□□□□□ -0.77
COL6A1-205ENST00000492851 DUS3LQ96G46 650 aaKnown RBP10.22□□□□□ -0.77
COL6A1-205ENST00000492851 MMP27Q9H306 513 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 GPR84Q9NQS5 396 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 SIRT7Q9NRC8 400 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 DUX4Q9UBX2 424 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 IKZF2Q9UKS7 526 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 PIGLQ9Y2B2 252 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 POLDIP2Q9Y2S7 368 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 KLHDC2Q9Y2U9 406 aa10.22□□□□□ -0.77
COL6A1-205ENST00000492851 ANKRD61A6NGH8 418 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 DHRS7CA6NNS2 312 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 G3V2T6 193 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 SLC1A7O00341 560 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 NOS1APO75052 506 aaPredicted RBP10.21□□□□□ -0.77
COL6A1-205ENST00000492851 RHBDL1O75783 438 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 TSPAN9O75954 239 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 PROK1P58294 105 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 ELF3P78545 371 aaPredicted RBP10.21□□□□□ -0.77
COL6A1-205ENST00000492851 TAF9Q16594 264 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 AANATQ16613 207 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 CEP78Q5JTW2 689 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 NXNL2Q5VZ03 156 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 PLCXD3Q63HM9 321 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 C11orf88Q6PI97 169 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 HAGHLQ6PII5 290 aaPredicted RBP10.21□□□□□ -0.77
COL6A1-205ENST00000492851 ZNF322Q6U7Q0 402 aaPredicted RBP10.21□□□□□ -0.77
COL6A1-205ENST00000492851 FGFRL1Q8N441 504 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 ZNF561Q8N587 486 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 BEND2Q8NDZ0 799 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 TMEM185AQ8NFB2 350 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 BCAS4Q8TDM0 211 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 TNFRSF14Q92956 283 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 HEXA-AS1Q9H8Q6 139 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 RAB18Q9NP72 206 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 KRT84Q9NSB2 600 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 SNX5Q9Y5X3 404 aa10.21□□□□□ -0.77
COL6A1-205ENST00000492851 IGKV1D-17A0A075B6S4 117 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 ZNF670-ZNF695F2Z2N8 137 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 LOC110117498-PIK3R3F6TDL0 507 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 PSMD9O00233 223 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 MRPL3P09001 348 aaKnown RBP10.2□□□□□ -0.78
COL6A1-205ENST00000492851 PRDX2P32119 198 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 SAA4P35542 130 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 DAPP51397 102 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 CAPZA1P52907 286 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 DEFA6Q01524 100 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 CLVS2Q5SYC1 327 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 BCL2L15Q5TBC7 163 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 Q6ZSV7 163 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 CALHM1Q8IU99 346 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 ZDHHC13Q8IUH4 622 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 GID4Q8IVV7 300 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 ELMOD2Q8IZ81 293 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 POC1AQ8NBT0 407 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 ZNRF1Q8ND25 227 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 CCDC54Q8NEL0 328 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 UBE2FQ969M7 185 aa10.2□□□□□ -0.78
COL6A1-205ENST00000492851 UTP4Q969X6 686 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms