RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 ZFP41Q8N8Y5 198 aa14.65□□□□□ -0.06
ERCC3-207ENST00000490062 SCCPDHQ8NBX0 429 aa14.65□□□□□ -0.06
ERCC3-207ENST00000490062 AQP3Q92482 292 aa14.65□□□□□ -0.06
ERCC3-207ENST00000490062 FCGR1BQ92637 280 aa14.65□□□□□ -0.06
ERCC3-207ENST00000490062 TMEM106AQ96A25 262 aa14.65□□□□□ -0.06
ERCC3-207ENST00000490062 MGLLQ99685 303 aa14.65□□□□□ -0.06
ERCC3-207ENST00000490062 PKIBQ9C010 78 aa14.65□□□□□ -0.06
ERCC3-207ENST00000490062 NEK6Q9HC98 313 aa14.65□□□□□ -0.06
ERCC3-207ENST00000490062 UFSP2Q9NUQ7 469 aa14.65□□□□□ -0.06
ERCC3-207ENST00000490062 TREM2Q9NZC2 230 aa14.65□□□□□ -0.06
ERCC3-207ENST00000490062 PPIAL4EA0A075B759 164 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 IGHV3-64DA0A0J9YX35 117 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 A6NLC8 198 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 PPIAL4DF5H284 164 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 H3BSH0 61 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 J3QT63 122 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 CDIPTO14735 213 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 CYB5R3P00387 301 aaPredicted RBP14.64□□□□□ -0.07
ERCC3-207ENST00000490062 INHBBP09529 407 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 OCM2P0CE71 109 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 PPIAL4FP0DN26 164 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 CPEP16870 476 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 FSTP19883 344 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 MAP2K4P45985 399 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 LMO4P61968 165 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 ZMYND11Q15326 602 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 UNQ9370/PRO34162Q6UXP9 181 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 ZNF826PQ6ZT77 177 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 CLDND2Q8NHS1 167 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 TSEN15Q8WW01 171 aaKnown RBP14.64□□□□□ -0.07
ERCC3-207ENST00000490062 UFD1Q92890 307 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 OPALINQ96PE5 141 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 TMEM165Q9HC07 324 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 PPIAL4AQ9Y536 164 aa14.64□□□□□ -0.07
ERCC3-207ENST00000490062 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.63□□□□□ -0.07
ERCC3-207ENST00000490062 LGALS8O00214 317 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 TNFRSF13BO14836 293 aaPredicted RBP14.63□□□□□ -0.07
ERCC3-207ENST00000490062 SULT1B1O43704 296 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 TNFAIP8O95379 198 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 IGFBP3P17936 291 aaPredicted RBP14.63□□□□□ -0.07
ERCC3-207ENST00000490062 AZGP1P25311 298 aaKnown RBP14.63□□□□□ -0.07
ERCC3-207ENST00000490062 PSMA1P25786 263 aaKnown RBP14.63□□□□□ -0.07
ERCC3-207ENST00000490062 RBP2P50120 134 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 IL24Q13007 206 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 TRAM1Q15629 374 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 TMEM249Q2WGJ8 235 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 ZNF404Q494X3 552 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 LHFPL2Q6ZUX7 228 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 KCTD8Q6ZWB6 473 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 PHC2Q8IXK0 858 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 SPICQ8N5J4 248 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 ZNF671Q8TAW3 534 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 RPL3LQ92901 407 aaKnown RBP14.63□□□□□ -0.07
ERCC3-207ENST00000490062 C12orf43Q96C57 262 aaKnown RBP14.63□□□□□ -0.07
ERCC3-207ENST00000490062 BORCS8Q96FH0 119 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 ZNF696Q9H7X3 374 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 POLDIP2Q9Y2S7 368 aa14.63□□□□□ -0.07
ERCC3-207ENST00000490062 ABCA1O95477 2261 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 IGKV1-27A0A075B6S5 117 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 ZNF879B4DU55 563 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 F5H0A9 414 aaPredicted RBP14.62□□□□□ -0.07
ERCC3-207ENST00000490062 WNT9BO14905 357 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 NDUFA2O43678 99 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 IGHV2-5P01817 119 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 ALDOBP05062 364 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 MUC1P15941 1255 aaPredicted RBP14.62□□□□□ -0.07
ERCC3-207ENST00000490062 MAPK3P27361 379 aaPredicted RBP14.62□□□□□ -0.07
ERCC3-207ENST00000490062 HAAOP46952 286 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 KCNJ8Q15842 424 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 AVPI1Q5T686 147 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.62□□□□□ -0.071e-7■■■■□ 21.5
ERCC3-207ENST00000490062 HAGHLQ6PII5 290 aaPredicted RBP14.62□□□□□ -0.07
ERCC3-207ENST00000490062 CRIP3Q6Q6R5 217 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 BIVMQ86UB2 503 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 POC1AQ8NBT0 407 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 OR13C5Q8NGS8 318 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 OR13C9Q8NGT0 318 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 LRRC29Q8WV35 223 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 PHYHIPQ92561 330 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 DERL3Q96Q80 235 aa14.62□□□□□ -0.07
ERCC3-207ENST00000490062 SF3B6Q9Y3B4 125 aaKnown RBP14.62□□□□□ -0.07
ERCC3-207ENST00000490062 TRAV38-1A0A0B4J264 116 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 OOEPA6NGQ2 149 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 TRIM64CA6NLI5 447 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 HEXAP06865 529 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 PGA5P0DJD9 388 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 RAB3AP20336 220 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 SOX2P48431 317 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 GZMKP49863 264 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 ATP1B3P54709 279 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 ERVK11-1P61568 191 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 KRTAP1-1Q07627 177 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 HNRNPA0Q13151 305 aaKnown RBP14.61□□□□□ -0.07
ERCC3-207ENST00000490062 DMRTC1Q5HYR2 192 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 DCDC5Q6ZRR9 648 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 FAM90A1Q86YD7 464 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 CALHM1Q8IU99 346 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 RAB39BQ96DA2 213 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 NRIP2Q9BQI9 281 aa14.61□□□□□ -0.07
ERCC3-207ENST00000490062 PATZ1Q9HBE1 687 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms