RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 CT45A3Q8NHU0 189 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 OR51E1Q8TCB6 317 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 RNF133Q8WVZ7 376 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 APH1BQ8WW43 257 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 HGDQ93099 445 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 TMEM56Q96MV1 263 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 ATOH8Q96SQ7 321 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 NUDT9Q9BW91 350 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 CDCA4Q9BXL8 241 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 PITPNM3Q9BZ71 974 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 ING2Q9H160 280 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 ABCC13Q9NSE7 274 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 PLCXD1Q9NUJ7 323 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 CALYQ9NYX4 217 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 OR1A1Q9P1Q5 309 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 POLR3HQ9Y535 204 aaPredicted RBP2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 TIMM22Q9Y584 194 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 OR51B2Q9Y5P1 312 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 MTCH2Q9Y6C9 303 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 PRSS21Q9Y6M0 314 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 V9GY05 133 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 TDRD15B5MCY1 1934 aaKnown RBP2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 RALGAPA1Q6GYQ0 2036 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 TRANK1O15050 2925 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 GON4LQ3T8J9 2241 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 KLF18A0A0U1RQI7 1052 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 LYRM9A8MSI8 78 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 HIDE1A8MVS5 230 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 C12orf77C9JDV5 145 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 FTCDNL1E5RQL4 147 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 ZFAND5O76080 213 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 LALBAP00709 142 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 TCRBP04435 133 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 EIF4EP06730 217 aaKnown RBP2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 MELTFP08582 738 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 KRT7P08729 469 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 OR8U9P0C7N5 309 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 CYBAP13498 195 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 IGLL1P15814 213 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 SPRP35270 261 aaPredicted RBP2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 ARR3P36575 388 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 KIR3DL2P43630 455 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 CACNG7P62955 275 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 HMGCS1Q01581 520 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 CD300CQ08708 224 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 SLC10A7Q0GE19 358 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 FCHO2Q0JRZ9 810 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 STX4Q12846 297 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 ELAVL2Q12926 359 aaKnown RBP2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 TEAD2Q15562 447 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 TRAM1Q15629 374 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 ZSCAN26Q16670 478 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 TPTE2P1Q5T6R2 138 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 RESP18Q5W5W9 173 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 LINC00173Q6ZV60 143 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 GTSCR1Q86UQ5 136 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 C17orf82Q86X59 251 aaPredicted RBP2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 PLA2G4DQ86XP0 818 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 STX12Q86Y82 276 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 ZADH2Q8N4Q0 377 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 C19orf18Q8NEA5 215 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 OR10AD1Q8NGE0 317 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 OR52E2Q8NGJ4 325 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 OR51G1Q8NGK1 321 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 OR6T1Q8NGN1 323 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 OR8U1Q8NH10 309 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 TMEM234Q8WY98 164 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 PTH2Q96A98 100 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 FGGYQ96C11 551 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 NXF2Q9GZY0 626 aaKnown RBP2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 OR51B5Q9H339 312 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 HRASLSQ9HDD0 168 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 ZDHHC4Q9NPG8 344 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 PAQR5Q9NXK6 330 aaPredicted RBP2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 TAS2R13Q9NYV9 303 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 USE1Q9NZ43 259 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 VAPAQ9P0L0 249 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 CACNG5Q9UF02 275 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 SAMHD1Q9Y3Z3 626 aaKnown RBP2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 STYXL1Q9Y6J8 313 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 NID2Q14112 1375 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 XIRP2A4UGR9 3374 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 TRIOBPQ9H2D6 2365 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 PLXNA1Q9UIW2 1896 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 IGHV3-16A0A0C4DH30 117 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 SLC5A10A0PJK1 596 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 MPTX1A8MV57 137 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 FAM220BPB1ANY3 271 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 B4DXG7 233 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 MAGEB4O15481 346 aaPredicted RBP2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 SRP72O76094 671 aaKnown RBP2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 AIFM1O95831 613 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 SLC25A27O95847 323 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 UGT2B7P16662 529 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 PCK1P35558 622 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 CEACAM6P40199 344 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 EFNA3P52797 238 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 PLK1P53350 603 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 SRPXP78539 464 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 FLOT2Q14254 428 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms