RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 GATBO75879 557 aaKnown RBP8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 ARL6IP5O75915 188 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 CDRT1O95170 752 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 ADH4P08319 380 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 SRD5A1P18405 259 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 MYL9P24844 172 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 IL2RGP31785 369 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 THBS2P35442 1172 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 ETV6P41212 452 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 FAM3AP98173 230 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 HLXQ14774 488 aaPredicted RBP8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 OR8B8Q15620 311 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 ZNF181Q2M3W8 571 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 RGS21Q2M5E4 152 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 YIF1BQ5BJH7 314 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 FAM120AOSQ5T036 256 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 FAM27D1Q5T7N8 215 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 TMEM244Q5VVB8 128 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 FBXW12Q6X9E4 464 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 KRT74Q7RTS7 529 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 ZNF676Q8N7Q3 588 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 CLDND2Q8NHS1 167 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 GTF3AQ92664 365 aaKnown RBP8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 SLC25A46Q96AG3 418 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 PPP1R14BQ96C90 147 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 ORAI1Q96D31 301 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 ELMOD3Q96FG2 381 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 REEP6Q96HR9 211 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 TMED9Q9BVK6 235 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 REPIN1Q9BWE0 567 aaKnown RBP8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 EGLN1Q9GZT9 426 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 OR10A2Q9H208 303 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 RNF167Q9H6Y7 350 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 PTTG3PQ9NZH4 202 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 N6AMT1Q9Y5N5 214 aa8.94□□□□□ -0.98
SCAMP4-208ENST00000489554 YLPM1P49750 1951 aaKnown RBP8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 ZSCAN5BA6NJL1 495 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 XRCC2O43543 280 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 SPRY3O43610 288 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 TIMM8AO60220 97 aaPredicted RBP8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 CDC14BO60729 498 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 IGHV1-46P01743 117 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 CD55P08174 381 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 PTBP1P26599 531 aaKnown RBP eCLIP8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 SDC2P34741 201 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 TGFBR1P36897 503 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 MTNR1BP49286 362 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 DVL1P1P54792 670 aaPredicted RBP8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 DEFA1P59665 94 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 DEFA3P59666 94 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 CR1LQ2VPA4 569 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 HFEQ30201 348 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 GFOD2Q3B7J2 385 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 C22orf42Q6IC83 251 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 KCTD12Q96CX2 325 aaKnown RBP8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 ADAT3Q96EY9 351 aaPredicted RBP8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 TIMD4Q96H15 378 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 FAM71F1Q96KD3 344 aaPredicted RBP8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 WDFY2Q96P53 400 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 DERL3Q96Q80 235 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 OR14A2Q96R54 314 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 MDFIQ99750 246 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 CCDC32Q9BV29 185 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 COMMD4Q9H0A8 199 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 PPP1R3EQ9H7J1 279 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 SP140LQ9H930 580 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 SNTG1Q9NSN8 517 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 HHLA2Q9UM44 414 aa8.93□□□□□ -0.98
SCAMP4-208ENST00000489554 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.92□□□□□ -0.986e-10■■■□□ 19.1
SCAMP4-208ENST00000489554 ZNF879B4DU55 563 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 SYT7O43581 403 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 DHRS3O75911 302 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 UCHL1P09936 223 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 KITLGP21583 273 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 TNFSF4P23510 183 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 MAPK3P27361 379 aaPredicted RBP8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 RPS19P39019 145 aaKnown RBP8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 RANBP1P43487 201 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 GSK3AP49840 483 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 PPP3R1P63098 170 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 PSG7Q13046 419 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 Q499Y3 187 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 ACSM3Q53FZ2 586 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 DDI2Q5TDH0 399 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 TMEM42Q69YG0 159 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 ZNF529Q6P280 563 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 CRIP3Q6Q6R5 217 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 METAP1DQ6UB28 335 aaPredicted RBP8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 DOK3Q7L591 496 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 GLCCI1Q86VQ1 547 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 OR5L1Q8NGL2 311 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 GPR148Q8TDV2 347 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 RAB1CQ92928 201 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 HAVCR1Q96D42 359 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 CMBLQ96DG6 245 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 SLC30A2Q9BRI3 323 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 MRI1Q9BV20 369 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 RGCCQ9H4X1 137 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 NARFLQ9H6Q4 476 aa8.92□□□□□ -0.98
SCAMP4-208ENST00000489554 SMURF1Q9HCE7 757 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms