RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 INPP5EQ9NRR6 644 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 SNTG1Q9NSN8 517 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 CTSZQ9UBR2 303 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 OPN4Q9UHM6 478 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 SLC7A11Q9UPY5 501 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 STAB1Q9NY15 2570 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 KIR2DS1A0A191URI9 304 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 LOC107986453A0A1B0GWG9 222 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 ANKRD61A6NGH8 418 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 ERICH4A6NGS2 130 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 NKX6-3A6NJ46 265 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 DVL1O14640 695 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 ENSAO43768 121 aaKnown RBP11.13□□□□□ -0.63
CCL28-202ENST00000489442 RHBDL1O75783 438 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 GATBO75879 557 aaKnown RBP11.13□□□□□ -0.63
CCL28-202ENST00000489442 RGS9O75916 674 aaPredicted RBP11.13□□□□□ -0.63
CCL28-202ENST00000489442 CLIC3O95833 236 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 FPR2P25090 351 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 HAAOP46952 286 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 ISL1P61371 349 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 PAX8Q06710 450 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 TMEM42Q69YG0 159 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 RDH10Q8IZV5 341 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 BPIFB2Q8N4F0 458 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 AQP3Q92482 292 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 TMIGD2Q96BF3 282 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 KAAG1Q9UBP8 84 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 MYRFQ9Y2G1 1151 aa11.13□□□□□ -0.63
CCL28-202ENST00000489442 FAM230AA0A1W2PPH8 454 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.12□□□□□ -0.63
CCL28-202ENST00000489442 TNFRSF13BO14836 293 aaPredicted RBP11.12□□□□□ -0.63
CCL28-202ENST00000489442 NDUFB3O43676 98 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 LIPFP07098 398 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 KIR3DL2P43630 455 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 GABRA2P47869 451 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 IKZF1Q13422 519 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 SMN1Q16637 294 aaKnown RBP11.12□□□□□ -0.63
CCL28-202ENST00000489442 LRRC10Q5BKY1 277 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 ZNF691Q5VV52 312 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 FDX2Q6P4F2 183 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 SYS1Q8N2H4 156 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 ZNF676Q8N7Q3 588 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 PNLDC1Q8NA58 520 aaKnown RBP11.12□□□□□ -0.63
CCL28-202ENST00000489442 OR52I1Q8NGK6 324 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 CNIH3Q8TBE1 160 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 TRMT10AQ8TBZ6 339 aaKnown RBP11.12□□□□□ -0.63
CCL28-202ENST00000489442 NPRL2Q8WTW4 380 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 APH1BQ8WW43 257 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 C22orf15Q8WYQ4 148 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 PELI1Q96FA3 418 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 MED30Q96HR3 178 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 SMURF1Q9HCE7 757 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 ERVK13-1Q9NX77 482 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 FRRS1LQ9P0K9 344 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 NLKQ9UBE8 527 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 POLDIP2Q9Y2S7 368 aa11.12□□□□□ -0.63
CCL28-202ENST00000489442 A0A0A6YYJ9 748 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 PQLC2LA1A4F0 135 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 IRGMA1A4Y4 181 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 OR2AT4A6NND4 320 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 J3QT63 122 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 WBP4O75554 376 aaKnown RBP11.11□□□□□ -0.63
CCL28-202ENST00000489442 ECDO95905 644 aaPredicted RBP11.11□□□□□ -0.63
CCL28-202ENST00000489442 IGHA1P01876 353 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 OCM2P0CE71 109 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 OCMP0CE72 109 aaPredicted RBP11.11□□□□□ -0.63
CCL28-202ENST00000489442 ZNF20P17024 532 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 CCR9P51686 369 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 GBX2P52951 348 aaPredicted RBP11.11□□□□□ -0.63
CCL28-202ENST00000489442 ELF3P78545 371 aaPredicted RBP11.11□□□□□ -0.63
CCL28-202ENST00000489442 SRSF2Q01130 221 aaKnown RBP11.11□□□□□ -0.63
CCL28-202ENST00000489442 PAX2Q02962 417 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 OGFRL1Q5TC84 451 aaPredicted RBP11.11□□□□□ -0.63
CCL28-202ENST00000489442 STUMQ69YW2 141 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 Q6ZSR3 168 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 BTN2A1Q7KYR7 527 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 EGFL6Q8IUX8 553 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 FAM216BQ8N7L0 139 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 PP6455Q8WZ26 134 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 C10orf35Q96D05 121 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 SUCNR1Q9BXA5 334 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 DNTTIP1Q9H147 329 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 ISG20L2Q9H9L3 353 aaKnown RBP11.11□□□□□ -0.63
CCL28-202ENST00000489442 MRPS18AQ9NVS2 196 aaKnown RBP11.11□□□□□ -0.63
CCL28-202ENST00000489442 RASL12Q9NYN1 266 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 NUP50Q9UKX7 468 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 HHLA2Q9UM44 414 aa11.11□□□□□ -0.63
CCL28-202ENST00000489442 C22orf46C9J442 243 aa11.1□□□□□ -0.63
CCL28-202ENST00000489442 CASQ2O14958 399 aaPredicted RBP11.1□□□□□ -0.63
CCL28-202ENST00000489442 NXPH2O95156 264 aa11.1□□□□□ -0.63
CCL28-202ENST00000489442 ISG15P05161 165 aa11.1□□□□□ -0.63
CCL28-202ENST00000489442 RPSAP08865 295 aaKnown RBP11.1□□□□□ -0.63
CCL28-202ENST00000489442 PPIAL4GP0DN37 164 aa11.1□□□□□ -0.63
CCL28-202ENST00000489442 DCKP27707 260 aa11.1□□□□□ -0.63
CCL28-202ENST00000489442 CAPGP40121 348 aa11.1□□□□□ -0.63
CCL28-202ENST00000489442 FUT6P51993 359 aa11.1□□□□□ -0.63
CCL28-202ENST00000489442 NANOS3P60323 173 aaKnown RBP11.1□□□□□ -0.63
CCL28-202ENST00000489442 FGF12P61328 243 aa11.1□□□□□ -0.63
CCL28-202ENST00000489442 IL13RA1P78552 427 aa11.1□□□□□ -0.63
CCL28-202ENST00000489442 ADARB1P78563 741 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms