RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 EIF1P41567 113 aaKnown RBP2.66□□□□□ -1.98
XRN1-213ENST00000489241 CXCL12P48061 93 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 STX4Q12846 297 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 TOMM34Q15785 309 aaPredicted RBP2.66□□□□□ -1.98
XRN1-213ENST00000489241 SLC25A35Q3KQZ1 300 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 CDNFQ49AH0 187 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 SYT6Q5T7P8 510 aaPredicted RBP2.66□□□□□ -1.98
XRN1-213ENST00000489241 ZNF691Q5VV52 312 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 RESP18Q5W5W9 173 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 SSX6Q7RTT6 188 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 COMTD1Q86VU5 262 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 TMEM25Q86YD3 366 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 GAPTQ8N292 157 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 TMEM256Q8N2U0 113 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 C17orf78Q8N4C9 275 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 TTLQ8NG68 377 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 OR1L1Q8NH94 360 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 ANGPTL6Q8NI99 470 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 S100PBPQ96BU1 408 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 SERPINB11Q96P15 392 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 TMED9Q9BVK6 235 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 SLC38A1Q9H2H9 487 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 VCXQ9H320 206 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 PLEKHF2Q9H8W4 249 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 TMBIM4Q9HC24 238 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 CD300AQ9UGN4 299 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 YTHDF2Q9Y5A9 579 aaKnown RBP2.66□□□□□ -1.98
XRN1-213ENST00000489241 ORC6Q9Y5N6 252 aa2.66□□□□□ -1.98
XRN1-213ENST00000489241 IGLV3-16A0A075B6K0 115 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 IGHV6-1A0A0B4J1U7 121 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 IGKV6-21A0A0C4DH24 114 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 PLPP3O14495 311 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 RBFOX2O43251 390 aaKnown RBP eCLIP2.65□□□□□ -1.99
XRN1-213ENST00000489241 NDUFS5O43920 106 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 LDOC1O95751 146 aaPredicted RBP2.65□□□□□ -1.99
XRN1-213ENST00000489241 ME2P23368 584 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 MAGEA3P43357 314 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 DSTNP60981 165 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 PTGES3Q15185 160 aaKnown RBP2.65□□□□□ -1.99
XRN1-213ENST00000489241 GUSBP11Q6P575 273 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 Q6ZT83 130 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 LRRC52Q8N7C0 313 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 OR13G1Q8NGZ3 307 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 UBALD1Q8TB05 177 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 LINC01560Q8TB33 94 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 SNF8Q96H20 258 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 ZNF396Q96N95 335 aaPredicted RBP2.65□□□□□ -1.99
XRN1-213ENST00000489241 ZFP3Q96NJ6 502 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 CYTH2Q99418 400 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 VAT1Q99536 393 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 CDX2Q99626 313 aaPredicted RBP2.65□□□□□ -1.99
XRN1-213ENST00000489241 NUDT9Q9BW91 350 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 EXOSC4Q9NPD3 245 aaKnown RBP2.65□□□□□ -1.99
XRN1-213ENST00000489241 C12orf4Q9NQ89 552 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 MS4A12Q9NXJ0 267 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 ANXA10Q9UJ72 324 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 RAB26Q9ULW5 256 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 LRRC42Q9Y546 428 aa2.65□□□□□ -1.99
XRN1-213ENST00000489241 GIMD1P0DJR0 217 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 IL3RAP26951 378 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 PSMB5P28074 263 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 MAGEA6P43360 314 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 ERFP50548 548 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 TSPAN5P62079 268 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 C16orf72Q14CZ0 275 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 ZBTB6Q15916 424 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 TEX30Q5JUR7 227 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 PDPK2PQ6A1A2 396 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 CLEC6AQ6EIG7 209 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 NANOGP8Q6NSW7 305 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 ZFP1Q6P2D0 407 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 AHSA2Q719I0 299 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 OR2L8Q8NGY9 312 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 SYNPRQ8TBG9 265 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 SFXN5Q8TD22 340 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 PDCD6IPQ8WUM4 868 aaKnown RBP2.64□□□□□ -1.99
XRN1-213ENST00000489241 OR5P2Q8WZ92 322 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 GTF2H4Q92759 462 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 CATSPER2Q96P56 530 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 SHCBP1LQ9BZQ2 653 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 WDR55Q9H6Y2 383 aaPredicted RBP2.64□□□□□ -1.99
XRN1-213ENST00000489241 KLK12Q9UKR0 248 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 PTPRTO14522 1441 aa2.64□□□□□ -1.99
XRN1-213ENST00000489241 BRCA1P38398 1863 aaKnown RBP2.63□□□□□ -1.99
XRN1-213ENST00000489241 TRPC5OSA6NMA1 111 aa2.63□□□□□ -1.99
XRN1-213ENST00000489241 CETN3O15182 167 aa2.63□□□□□ -1.99
XRN1-213ENST00000489241 SGCEO43556 437 aa2.63□□□□□ -1.99
XRN1-213ENST00000489241 PLIN3O60664 434 aa2.63□□□□□ -1.99
XRN1-213ENST00000489241 SHOX2O60902 331 aaPredicted RBP2.63□□□□□ -1.99
XRN1-213ENST00000489241 MED6O75586 246 aa2.63□□□□□ -1.99
XRN1-213ENST00000489241 CCNKO75909 580 aa2.63□□□□□ -1.99
XRN1-213ENST00000489241 VAMP5O95183 116 aa2.63□□□□□ -1.99
XRN1-213ENST00000489241 CISD3P0C7P0 127 aa2.63□□□□□ -1.99
XRN1-213ENST00000489241 LINC00869P0C866 280 aa2.63□□□□□ -1.99
XRN1-213ENST00000489241 SLC35E2BP0CK96 405 aa2.63□□□□□ -1.99
XRN1-213ENST00000489241 C1GALT1C1LP0DN25 315 aa2.63□□□□□ -1.99
XRN1-213ENST00000489241 PSMB2P49721 201 aa2.63□□□□□ -1.99
XRN1-213ENST00000489241 LAMTOR4Q0VGL1 99 aa2.63□□□□□ -1.99
XRN1-213ENST00000489241 EIF4EBP2Q13542 120 aaPredicted RBP2.63□□□□□ -1.99
XRN1-213ENST00000489241 TPBGQ13641 420 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms