RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 IFNA2P01563 188 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 MBP02144 154 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 ZNF84P51523 738 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 FAM3AP98173 230 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 OPN5Q6U736 354 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 GKN2Q86XP6 184 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 FAM219AQ8IW50 185 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 FAM71E2Q8N5Q1 922 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 CA5BP1Q8WTZ4 195 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 HIST1H2BAQ96A08 127 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 AKR1E2Q96JD6 320 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 CLCC1Q96S66 551 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 C14orf166Q9Y224 244 aaKnown RBP17.17■□□□□ 0.34
HMG20B-213ENST00000488973 POLR1DQ9Y2S0 133 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 BTBD17A6NE02 478 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 FOXI3A8MTJ6 420 aaPredicted RBP17.17■□□□□ 0.34
HMG20B-213ENST00000488973 ZNF121P58317 390 aaPredicted RBP17.17■□□□□ 0.34
HMG20B-213ENST00000488973 HGFACQ04756 655 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 SPEM2Q0P670 501 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 EIF3IQ13347 325 aaKnown RBP17.17■□□□□ 0.34
HMG20B-213ENST00000488973 DNLZQ5SXM8 178 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 OR2A2Q6IF42 318 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 PRSS58Q8IYP2 241 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 OR51T1Q8NGJ9 327 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 CYYR1Q96J86 154 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 B3GAT1Q9P2W7 334 aa17.17■□□□□ 0.34
HMG20B-213ENST00000488973 FER1L5A0AVI2 2057 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 VSTM2BA6NLU5 285 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 AP4M1O00189 453 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 CPT2P23786 658 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 RBMXP38159 391 aaKnown RBP17.16■□□□□ 0.34
HMG20B-213ENST00000488973 ECI1P42126 302 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 ZNF239Q16600 458 aaKnown RBP17.16■□□□□ 0.34
HMG20B-213ENST00000488973 IAH1Q2TAA2 248 aaPredicted RBP17.16■□□□□ 0.34
HMG20B-213ENST00000488973 DOK3Q7L591 496 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 ZNF383Q8NA42 475 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 FAM71F1Q96KD3 344 aaPredicted RBP17.16■□□□□ 0.34
HMG20B-213ENST00000488973 VN1R1Q9GZP7 353 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 ZNF319Q9P2F9 582 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 FBXL17Q9UF56 701 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 TUBD1Q9UJT1 453 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 A0A1W2PPE3 182 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 C2orf72A6NCS6 295 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 DEDDO75618 318 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 MT-ND4LP03901 98 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 OR8U9P0C7N5 309 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 EDN3P14138 238 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 FCGR2CP31995 323 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 PTGER4P35408 488 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 CYB5R2Q6BCY4 276 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 TGIF2LXQ8IUE1 241 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 FOXRED2Q8IWF2 684 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 OR8U1Q8NH10 309 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 PRDM13Q9H4Q3 707 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 TUBA4BQ9H853 241 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 CD207Q9UJ71 328 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 VDAC3Q9Y277 283 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 STARD10Q9Y365 291 aa17.16■□□□□ 0.34
HMG20B-213ENST00000488973 CCDC85CA6NKD9 419 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 SLC2A1P11166 492 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 ALDH3B1P43353 468 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 CLRN1P58418 232 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 HNRNPKP61978 463 aaKnown RBP eCLIP17.15■□□□□ 0.348e-7■■■■■ 27.7
HMG20B-213ENST00000488973 GABREP78334 506 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 FOXO1Q12778 655 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 CHRFAM7AQ494W8 412 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 COMMD1Q8N668 190 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 PNLDC1Q8NA58 520 aaKnown RBP17.15■□□□□ 0.34
HMG20B-213ENST00000488973 LMX1AQ8TE12 382 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 SECTM1Q8WVN6 248 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 NUDT22Q9BRQ3 303 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 GON4LQ3T8J9 2241 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 MYO9BQ13459 2157 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 MARCH11A6NNE9 402 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 DDTP30046 118 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 FOXF1Q12946 379 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 ETV3LQ6ZN32 361 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 C17orf82Q86X59 251 aaPredicted RBP17.15■□□□□ 0.34
HMG20B-213ENST00000488973 UBAC2Q8NBM4 344 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 NOXO1Q8NFA2 376 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 OR9K2Q8NGE7 335 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 FNDC9Q8TBE3 224 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 PRRX2Q99811 253 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 RPS10P5Q9NQ39 176 aa17.15■□□□□ 0.34
HMG20B-213ENST00000488973 IGKV1-9A0A0C4DH69 117 aa17.14■□□□□ 0.33
HMG20B-213ENST00000488973 SERPINE3A8MV23 424 aa17.14■□□□□ 0.33
HMG20B-213ENST00000488973 KNG1P01042 644 aa17.14■□□□□ 0.33
HMG20B-213ENST00000488973 FOSL2P15408 326 aa17.14■□□□□ 0.33
HMG20B-213ENST00000488973 CEACAM6P40199 344 aa17.14■□□□□ 0.33
HMG20B-213ENST00000488973 ID4P47928 161 aa17.14■□□□□ 0.33
HMG20B-213ENST00000488973 TMEM33P57088 247 aa17.14■□□□□ 0.33
HMG20B-213ENST00000488973 NUTF2P61970 127 aaKnown RBP17.14■□□□□ 0.33
HMG20B-213ENST00000488973 ARL6IP1Q15041 203 aa17.14■□□□□ 0.33
HMG20B-213ENST00000488973 OR1L3Q8NH93 324 aa17.14■□□□□ 0.33
HMG20B-213ENST00000488973 PECRQ9BY49 303 aa17.14■□□□□ 0.33
HMG20B-213ENST00000488973 UNKLQ9H9P5 680 aaKnown RBP17.14■□□□□ 0.33
HMG20B-213ENST00000488973 C19orf12Q9NSK7 152 aa17.14■□□□□ 0.33
HMG20B-213ENST00000488973 AMDHD2Q9Y303 409 aa17.14■□□□□ 0.33
HMG20B-213ENST00000488973 RALGAPA1Q6GYQ0 2036 aa17.14■□□□□ 0.33
HMG20B-213ENST00000488973 H3BML4 177 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms