RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 ECH1Q13011 328 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 RBMS2Q15434 407 aaKnown RBP10.57□□□□□ -0.72
HDAC6-230ENST00000488543 SNAI3Q3KNW1 292 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 ANKRD16Q6P6B7 361 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 SLC16A14Q7RTX9 510 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 COMMD2Q86X83 199 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 MCEMP1Q8IX19 187 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 NKAIN3Q8N8D7 197 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 OR52N4Q8NGI2 321 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 APH1AQ96BI3 265 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 SNRNP40Q96DI7 357 aaKnown RBP10.57□□□□□ -0.72
HDAC6-230ENST00000488543 POFUT1Q9H488 388 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 TIMM10BQ9Y5J6 103 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 B8ZZF3 427 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 ZNF587BE7ETH6 402 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 TSPAN4O14817 238 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 OR2A4O95047 310 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 CRYABP02511 175 aaKnown RBP10.57□□□□□ -0.72
HDAC6-230ENST00000488543 NMBP08949 121 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 ZNF20P17024 532 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 AGTR1P30556 359 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 RAP2BP61225 183 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 NKPD1Q17RQ9 610 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 GFOD2Q3B7J2 385 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 SLC22A6Q4U2R8 563 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 ZNF324BQ6AW86 544 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-230ENST00000488543 LIN54Q6MZP7 749 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 FAM180AQ6UWF9 173 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 DRAM2Q6UX65 266 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 RNF144BQ7Z419 303 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 RPRMLQ8N4K4 120 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 ARL6IP6Q8N6S5 226 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 OR2AK2Q8NG84 335 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 OR4S1Q8NGB4 309 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 OR4D6Q8NGJ1 314 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 OR13C9Q8NGT0 318 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 CMBLQ96DG6 245 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 OR2A7Q96R45 310 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 CLCF1Q9UBD9 225 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 V9GYS6 101 aa10.57□□□□□ -0.72
HDAC6-230ENST00000488543 NBASA2RRP1 2371 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 KCNAB3O43448 404 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 APOC1P02654 83 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 PRKACBP22694 351 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 PCBD1P61457 104 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 ZMYND11Q15326 602 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 LRRC37A5PQ49AS3 106 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 BEX5Q5H9J7 111 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 FAM74A1Q5RGS3 127 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 P4HA3Q7Z4N8 544 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 STPG2Q8N412 459 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 JAGN1Q8N5M9 183 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 C9orf106Q8NAJ2 232 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 OR5D14Q8NGL3 314 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 ASF1BQ9NVP2 202 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 DCAF16Q9NXF7 216 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 PRSS50Q9UI38 385 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 F5H5P2 479 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 RAB3AP20336 220 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 S100A11P31949 105 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 PRSS3P35030 304 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 HTR5AP47898 357 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 BTN1A1Q13410 526 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 ATXN7L3Q14CW9 347 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-230ENST00000488543 TUSC1Q2TAM9 212 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 DMRTC1Q5HYR2 192 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 STEAP1BQ6NZ63 245 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 BOLLQ8N9W6 283 aaKnown RBP10.56□□□□□ -0.72
HDAC6-230ENST00000488543 ACBD4Q8NC06 268 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 SGK3Q96BR1 496 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 CNTD2Q9H8S5 307 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 GP6Q9HCN6 339 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 NUP50Q9UKX7 468 aa10.56□□□□□ -0.72
HDAC6-230ENST00000488543 UBE2QL1A1L167 161 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 ZNF503-AS2A6NEH8 195 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 TMEM235A6NFC5 223 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 FARS2O95363 451 aaKnown RBP10.55□□□□□ -0.72
HDAC6-230ENST00000488543 IL5P05113 134 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 AKAIN1P0CW23 69 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 DHODHQ02127 395 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 FOXF2Q12947 444 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 SCGB2B2Q4G0G5 96 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 DNM1P46Q6ZS02 220 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 GABRG1Q8N1C3 465 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 FAM46BQ96A09 425 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 FOXRED1Q96CU9 486 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-230ENST00000488543 RADILQ96JH8 1075 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 A0A096LPE4 126 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 IGKV1-9A0A0C4DH69 117 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 A0A1W2PPZ6 126 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 SNRPGP15A8MWD9 76 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 DHRS3O75911 302 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 TPPPO94811 219 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 RLN2P04090 185 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 AMY2AP04746 511 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 PPP3CBP16298 524 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 MRPS10P82664 201 aaKnown RBP10.55□□□□□ -0.72
HDAC6-230ENST00000488543 LY6DQ14210 128 aa10.55□□□□□ -0.72
HDAC6-230ENST00000488543 ACSF3Q4G176 576 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-230ENST00000488543 PABPC1L2AQ5JQF8 200 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms