RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 FTMTQ8N4E7 242 aa10.95□□□□□ -0.66
NELFE-209ENST00000488426 PAQR4Q8N4S7 273 aaPredicted RBP10.95□□□□□ -0.66
NELFE-209ENST00000488426 KCNG3Q8TAE7 436 aa10.95□□□□□ -0.66
NELFE-209ENST00000488426 FCAMRQ8WWV6 532 aa10.95□□□□□ -0.66
NELFE-209ENST00000488426 ZC3HAV1LQ96H79 300 aaKnown RBP10.95□□□□□ -0.66
NELFE-209ENST00000488426 C1orf147Q96MC9 270 aaPredicted RBP10.95□□□□□ -0.66
NELFE-209ENST00000488426 NUDT16L1Q9BRJ7 211 aaKnown RBP10.95□□□□□ -0.66
NELFE-209ENST00000488426 PTTG3PQ9NZH4 202 aa10.95□□□□□ -0.66
NELFE-209ENST00000488426 EIF3KQ9UBQ5 218 aaKnown RBP10.95□□□□□ -0.66
NELFE-209ENST00000488426 SLC7A11Q9UPY5 501 aa10.95□□□□□ -0.66
NELFE-209ENST00000488426 LYRM1O43325 122 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 KDM4BO94953 1096 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 CST4P01036 141 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 CD3GP09693 182 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 FUT6P51993 359 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 UNC119Q13432 240 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 KCNJ8Q15842 424 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 OR10K2Q6IF99 312 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 MTFR2Q6P444 385 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 ZNF474Q6S9Z5 364 aaPredicted RBP10.94□□□□□ -0.66
NELFE-209ENST00000488426 CCBE1Q6UXH8 406 aaPredicted RBP10.94□□□□□ -0.66
NELFE-209ENST00000488426 RFPL4BQ6ZWI9 263 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 RNF144BQ7Z419 303 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 ZNF295-AS1Q8N0V1 137 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 OR56B2PQ8NGI1 322 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 NPRL2Q8WTW4 380 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 FAM46BQ96A09 425 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 RBFOX1Q9NWB1 397 aaKnown RBP10.94□□□□□ -0.66
NELFE-209ENST00000488426 PRELID1Q9Y255 219 aa10.94□□□□□ -0.66
NELFE-209ENST00000488426 RBMX2Q9Y388 322 aaKnown RBP10.94□□□□□ -0.66
NELFE-209ENST00000488426 TRAV18A0A075B6X5 111 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 A0A1W2PR80 420 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 NKX2-6A6NCS4 301 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 IGLV1-44P01699 117 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 CELA3BP08861 270 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 SPNP16150 400 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 PSMB1P20618 241 aaKnown RBP10.93□□□□□ -0.66
NELFE-209ENST00000488426 IL32P24001 234 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 RBP2P50120 134 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 MTCP1P56278 107 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 AP3S2P59780 193 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 CDH24Q86UP0 819 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 MYPOPQ86VE0 399 aaPredicted RBP10.93□□□□□ -0.66
NELFE-209ENST00000488426 LIX1LQ8IVB5 337 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 TOMM5Q8N4H5 51 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 OR52I2Q8NH67 350 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 TNFAIP8L1Q8WVP5 186 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 BORCS8Q96FH0 119 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 C7orf50Q9BRJ6 194 aaKnown RBP10.93□□□□□ -0.66
NELFE-209ENST00000488426 CST11Q9H112 138 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 AUNIPQ9H7T9 357 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 ZNF629Q9UEG4 869 aaPredicted RBP10.93□□□□□ -0.66
NELFE-209ENST00000488426 SPG11Q96JI7 2443 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 SULT1C2O00338 296 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 RGS13O14921 159 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 SSX4O60224 188 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 SMPD2O60906 423 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 ECDO95905 644 aaPredicted RBP10.93□□□□□ -0.66
NELFE-209ENST00000488426 AGAP20933 346 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 GDNFP39905 211 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 PRSS12P56730 875 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 ZP1P60852 638 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 DYRK1AQ13627 763 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 TIMM23BQ5SRD1 257 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 PLCXD3Q63HM9 321 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 UNQ6126/PRO20091Q6UXV3 157 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 FBXW12Q6X9E4 464 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 MOB3CQ70IA8 216 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 ENKURQ8TC29 256 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 PIGCQ92535 297 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 S100A13Q99584 98 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 POFUT1Q9H488 388 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 MYEF2Q9P2K5 600 aaKnown RBP10.93□□□□□ -0.66
NELFE-209ENST00000488426 SLC25A15Q9Y619 301 aa10.93□□□□□ -0.66
NELFE-209ENST00000488426 HCFC1P51610 2035 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 A0A0G2JNJ9 132 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 LOC105371267A0A1B0GV96 52 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 FAM230AA0A1W2PPH8 454 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 CD300LBA8K4G0 201 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 CENPXA8MT69 81 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 A8MXE2 369 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 ORC5O43913 435 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 CDC14BO60729 498 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 CHRM2P08172 466 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 TUBG1P23258 451 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 PRSS3P35030 304 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 ATP1B3P54709 279 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 KRTAP10-9P60411 292 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 PPP1CBP62140 327 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 SSBP1Q04837 148 aaKnown RBP10.92□□□□□ -0.66
NELFE-209ENST00000488426 KLF9Q13886 244 aaPredicted RBP10.92□□□□□ -0.66
NELFE-209ENST00000488426 HLXQ14774 488 aaPredicted RBP10.92□□□□□ -0.66
NELFE-209ENST00000488426 C3orf36Q3SXR2 165 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 RNASE12Q5GAN4 147 aaKnown RBP10.92□□□□□ -0.66
NELFE-209ENST00000488426 LURAP1LQ8IV03 231 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 CA5BP1Q8WTZ4 195 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 DEDD2Q8WXF8 326 aa10.92□□□□□ -0.66
NELFE-209ENST00000488426 URM1Q9BTM9 101 aaKnown RBP10.92□□□□□ -0.66
NELFE-209ENST00000488426 PAPOLGQ9BWT3 736 aaKnown RBP10.92□□□□□ -0.66
NELFE-209ENST00000488426 TMEM59Q9BXS4 323 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms