RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 PP6455Q8WZ26 134 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 RAB1CQ92928 201 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 ERGIC1Q969X5 290 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 TMEM106AQ96A25 262 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 C10orf35Q96D05 121 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 OPALINQ96PE5 141 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 OR14A2Q96R54 314 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 GAL3ST1Q99999 423 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 OR51I2Q9H344 312 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 ACOT13Q9NPJ3 140 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 TAS2R4Q9NYW5 299 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 RNF7Q9UBF6 113 aa9.28□□□□□ -0.92
UBE4B-210ENST00000488228 ANK3Q12955 4377 aaKnown RBP9.27□□□□□ -0.93
UBE4B-210ENST00000488228 IGHV3OR15-7A0A075B7D8 119 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 TRBV5-5A0A0J9YX44 114 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.27□□□□□ -0.93
UBE4B-210ENST00000488228 J3QT63 122 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 IFNL4K9M1U5 179 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 PLPP2O43688 288 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 SYNGR1O43759 233 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 RPSAP08865 295 aaKnown RBP9.27□□□□□ -0.93
UBE4B-210ENST00000488228 ZNF16P17020 682 aaPredicted RBP9.27□□□□□ -0.93
UBE4B-210ENST00000488228 ATF1P18846 271 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 AZGP1P25311 298 aaKnown RBP9.27□□□□□ -0.93
UBE4B-210ENST00000488228 MDH2P40926 338 aaKnown RBP9.27□□□□□ -0.93
UBE4B-210ENST00000488228 HAAOP46952 286 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 RPS25P62851 125 aaKnown RBP9.27□□□□□ -0.93
UBE4B-210ENST00000488228 INSL4Q14641 139 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 TMEM249Q2WGJ8 235 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 KCTD21Q4G0X4 260 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 YIF1BQ5BJH7 314 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 SFRP4Q6FHJ7 346 aaPredicted RBP9.27□□□□□ -0.93
UBE4B-210ENST00000488228 ZNF773Q6PK81 442 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 UTS2BQ765I0 119 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 ZNF367Q7RTV3 350 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 RNF144BQ7Z419 303 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 PEG10Q86TG7 708 aaKnown RBP9.27□□□□□ -0.93
UBE4B-210ENST00000488228 CALHM1Q8IU99 346 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 C1orf87Q8N0U7 546 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 DEFB108BQ8NET1 73 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 OR51A2Q8NGJ7 313 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 AQP3Q92482 292 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 UFD1Q92890 307 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 RFT1Q96AA3 541 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 SEH1LQ96EE3 360 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 ZNF488Q96MN9 340 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 TECTBQ96PL2 329 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 SPACA5Q96QH8 159 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 NKX3-1Q99801 234 aaPredicted RBP9.27□□□□□ -0.93
UBE4B-210ENST00000488228 TMED9Q9BVK6 235 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 ZCCHC4Q9H5U6 513 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 SLC7A11Q9UPY5 501 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 LRCH1Q9Y2L9 728 aa9.27□□□□□ -0.93
UBE4B-210ENST00000488228 PPIAL4EA0A075B759 164 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 A0A1W2PPK0 400 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 MAGEA13PA6NCF6 341 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 PPIAL4DF5H284 164 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 AKR7A2O43488 359 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 SULT1B1O43704 296 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 SERPINA3P01011 423 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 CD2P06729 351 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 OCMP0CE72 109 aaPredicted RBP9.26□□□□□ -0.93
UBE4B-210ENST00000488228 PPIAL4FP0DN26 164 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 POU3F4P49335 361 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 EMX1Q04741 257 aaPredicted RBP9.26□□□□□ -0.93
UBE4B-210ENST00000488228 MLLT11Q13015 90 aaPredicted RBP9.26□□□□□ -0.93
UBE4B-210ENST00000488228 Q499Y3 187 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 FAM76BQ5HYJ3 339 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 ANGPTL5Q86XS5 388 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 SPARTQ8N0X7 666 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 SVOPQ8N4V2 548 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 PARP16Q8N5Y8 322 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 OR5D18Q8NGL1 313 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 SPSB1Q96BD6 273 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 BORCS8Q96FH0 119 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 MGLLQ99685 303 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 YTHDF1Q9BYJ9 559 aaKnown RBP9.26□□□□□ -0.93
UBE4B-210ENST00000488228 WDR13Q9H1Z4 485 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 ZNF665Q9H7R5 613 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 PPIAL4AQ9Y536 164 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 LRRC42Q9Y546 428 aa9.26□□□□□ -0.93
UBE4B-210ENST00000488228 TRAV8-7A0A075B6U6 113 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 TRBV5-7A0A0A0MS05 114 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 OOEPA6NGQ2 149 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 CEACAM18A8MTB9 384 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 SRRM5B3KS81 715 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 ZNF879B4DU55 563 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 FAM157AC9JC47 383 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 LGALS8O00214 317 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 MRPS14O60783 128 aaKnown RBP9.25□□□□□ -0.93
UBE4B-210ENST00000488228 INMTO95050 263 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 IGHV2-5P01817 119 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 TFF1P04155 84 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 CD1AP06126 327 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 HCKP08631 526 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 IGHV4-31P0DP07 118 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 PCMT1P22061 227 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 PRKACBP22694 351 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 PSMB9P28065 219 aa9.25□□□□□ -0.93
UBE4B-210ENST00000488228 RBP2P50120 134 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms