RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 OR3A2P47893 321 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 CYB561P49447 251 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 UBE2V2Q15819 145 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 PRSS54Q6PEW0 395 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 C1QL2Q7Z5L3 287 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 MARC2Q969Z3 335 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 TMEM100Q9NV29 134 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 NCOA6Q14686 2063 aaPredicted RBP22.81■■□□□ 1.24
HLA-C-208ENST00000487245 LRRC3CA6NJW4 275 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 FIGNL2A6NMB9 653 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 CDK2AP1O14519 115 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 HPNP05981 417 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 MPLP40238 635 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 SNU13P55769 128 aaKnown RBP22.81■■□□□ 1.24
HLA-C-208ENST00000487245 LPAL2Q16609 132 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 EMG1Q92979 244 aaKnown RBP22.81■■□□□ 1.24
HLA-C-208ENST00000487245 NECAB3Q96P71 396 aaPredicted RBP22.81■■□□□ 1.24
HLA-C-208ENST00000487245 S100A13Q99584 98 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 P4HTMQ9NXG6 502 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 PIGLQ9Y2B2 252 aa22.81■■□□□ 1.24
HLA-C-208ENST00000487245 MED12Q93074 2177 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 ZNF716A6NP11 495 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 MPTX1A8MV57 137 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 H0YIZ8 118 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 STMND1H3BQB6 276 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 SGCEO43556 437 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 RPS2P15880 293 aaKnown RBP22.8■■□□□ 1.24
HLA-C-208ENST00000487245 ATF4P18848 351 aaPredicted RBP22.8■■□□□ 1.24
HLA-C-208ENST00000487245 CPT2P23786 658 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 ECI1P42126 302 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 SCRN3Q0VDG4 424 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 STK11Q15831 433 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 ABLIM2Q6H8Q1 611 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 ELP2Q6IA86 826 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 AAED1Q7RTV5 226 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 CSNK2A3Q8NEV1 391 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 BPIFCQ8NFQ6 507 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 ADGRG7Q96K78 797 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 CYTL1Q9NRR1 136 aa22.8■■□□□ 1.24
HLA-C-208ENST00000487245 NUDT19A8MXV4 375 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 LINC01387J3KSC0 135 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 RRP8O43159 456 aaKnown RBP22.79■■□□□ 1.24
HLA-C-208ENST00000487245 CRYGSP22914 178 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 BLVRBP30043 206 aaPredicted RBP22.79■■□□□ 1.24
HLA-C-208ENST00000487245 PLEKHN1Q494U1 663 aaPredicted RBP22.79■■□□□ 1.24
HLA-C-208ENST00000487245 SPRY4Q9C004 299 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 C12orf4Q9NQ89 552 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 TMEM38BQ9NVV0 291 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 A0A0C4DFX4 3053 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 CXCL13O43927 109 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 APOC3P02656 99 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 JMJD7P0C870 316 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 FAHP16930 419 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 IL15RAQ13261 267 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 ANKRD55Q3KP44 614 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 PDSS1Q5T2R2 415 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 BAP18Q8IXM2 172 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 C2orf50Q96LR7 162 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 DNAJB11Q9UBS4 358 aa22.79■■□□□ 1.24
HLA-C-208ENST00000487245 CCDC187A0A096LP49 1063 aa22.78■■□□□ 1.24
HLA-C-208ENST00000487245 TRAPPC6AO75865 159 aa22.78■■□□□ 1.24
HLA-C-208ENST00000487245 FCGR2AP12318 317 aa22.78■■□□□ 1.24
HLA-C-208ENST00000487245 SLC9A3R2Q15599 337 aa22.78■■□□□ 1.24
HLA-C-208ENST00000487245 RIPPLY2Q5TAB7 128 aa22.78■■□□□ 1.24
HLA-C-208ENST00000487245 ZSCAN4Q8NAM6 433 aaPredicted RBP22.78■■□□□ 1.24
HLA-C-208ENST00000487245 RRNAD1Q96FB5 475 aaKnown RBP22.78■■□□□ 1.24
HLA-C-208ENST00000487245 AQP10Q96PS8 301 aa22.78■■□□□ 1.24
HLA-C-208ENST00000487245 ST6GALNAC5Q9BVH7 336 aa22.78■■□□□ 1.24
HLA-C-208ENST00000487245 ARRDC1-AS1Q9H2J1 176 aa22.78■■□□□ 1.24
HLA-C-208ENST00000487245 SYNGR3O43761 229 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 CD79AP11912 226 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 TMEM105Q8N8V8 129 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 POC1AQ8NBT0 407 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 SEMA6DQ8NFY4 1073 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 OR10D3Q8NH80 312 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 OR1F12Q8NHA8 337 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 SGK3Q96BR1 496 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 ZNF837Q96EG3 531 aaPredicted RBP22.77■■□□□ 1.24
HLA-C-208ENST00000487245 CPNE2Q96FN4 548 aaPredicted RBP22.77■■□□□ 1.24
HLA-C-208ENST00000487245 CRLF2Q9HC73 371 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 EHFQ9NZC4 300 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 BOKQ9UMX3 212 aaPredicted RBP22.77■■□□□ 1.24
HLA-C-208ENST00000487245 PCDHB10Q9UN67 800 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 DBHP09172 617 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 RFPL3SP0C7P2 107 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 WIPI1Q5MNZ9 446 aaPredicted RBP22.77■■□□□ 1.24
HLA-C-208ENST00000487245 TCEAL6Q6IPX3 200 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 ATRAIDQ6UW56 229 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 UNQ6126/PRO20091Q6UXV3 157 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 DTX1Q86Y01 620 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 OR5D18Q8NGL1 313 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 OR1S2Q8NGQ3 325 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 TCEAL3Q969E4 200 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 ZNF391Q9UJN7 358 aa22.77■■□□□ 1.24
HLA-C-208ENST00000487245 DNASE2O00115 360 aaPredicted RBP22.76■■□□□ 1.23
HLA-C-208ENST00000487245 GDF1P27539 372 aa22.76■■□□□ 1.23
HLA-C-208ENST00000487245 PCBD1P61457 104 aa22.76■■□□□ 1.23
HLA-C-208ENST00000487245 CPNE4Q96A23 557 aaPredicted RBP22.76■■□□□ 1.23
HLA-C-208ENST00000487245 SPSB1Q96BD6 273 aa22.76■■□□□ 1.23
HLA-C-208ENST00000487245 ZNF775Q96BV0 537 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms