RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 MYOGP15173 224 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 FGF7P21781 194 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 CTNNB1P35222 781 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 TAS2R46P59540 309 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 DEFB103AP81534 67 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 SGCGQ13326 291 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 TMEM176BQ3YBM2 270 aaPredicted RBP9.38□□□□□ -0.91
CCDC171-208ENST00000486641 RD3Q7Z3Z2 195 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 CYB561D1Q8N8Q1 229 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 NAXEQ8NCW5 288 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 SLC26A10Q8NG04 563 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 KCNG3Q8TAE7 436 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 ELSPBP1Q96BH3 223 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 SNX22Q96L94 193 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 TMEM59Q9BXS4 323 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 LIPGQ9Y5X9 500 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 CACNA1IQ9P0X4 2223 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 FTCDNL1E5RQL4 147 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 DVL1O14640 695 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 CRTAPO75718 401 aaPredicted RBP9.37□□□□□ -0.91
CCDC171-208ENST00000486641 IL18BPO95998 194 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 HLA-DOBP13765 273 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 MMP16P51512 607 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 FMODQ06828 376 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 SGCBQ16585 318 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 SP6Q3SY56 376 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 GPR157Q5UAW9 335 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 GRASPQ7Z6J2 395 aaPredicted RBP9.37□□□□□ -0.91
CCDC171-208ENST00000486641 SULF2Q8IWU5 870 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 ZFP62Q8NB50 900 aaPredicted RBP9.37□□□□□ -0.91
CCDC171-208ENST00000486641 SNIP1Q8TAD8 396 aaKnown RBP9.37□□□□□ -0.91
CCDC171-208ENST00000486641 DGAT2Q96PD7 388 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 DDA1Q9BW61 102 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 PBOV1Q9GZY1 135 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 OR14J1Q9UGF5 321 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 IGKV1D-8A0A087WSZ0 117 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 PRSS38A1L453 326 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 CRYM-AS1A6NIL9 109 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 HIDE1A8MVS5 230 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 UTS2O95399 124 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 NR2C1P13056 603 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 SEC13P55735 322 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 ICAM4Q14773 271 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 CST6Q15828 149 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 CHRFAM7AQ494W8 412 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 ARHGEF39Q8N4T4 335 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 BAHD1Q8TBE0 780 aaPredicted RBP9.37□□□□□ -0.91
CCDC171-208ENST00000486641 RCC1LQ96I51 464 aaKnown RBP9.37□□□□□ -0.91
CCDC171-208ENST00000486641 ZNF2Q9BSG1 426 aaPredicted RBP9.37□□□□□ -0.91
CCDC171-208ENST00000486641 METTL9Q9H1A3 318 aa9.37□□□□□ -0.91
CCDC171-208ENST00000486641 UNC80Q8N2C7 3258 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 CPAMD8Q8IZJ3 1885 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 IGKV1D-43A0A0B4J1Z2 117 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 GEMIN2O14893 280 aaKnown RBP9.36□□□□□ -0.91
CCDC171-208ENST00000486641 DXOO77932 396 aaKnown RBP9.36□□□□□ -0.91
CCDC171-208ENST00000486641 DMRTC1Q5HYR2 192 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 WDFY1Q8IWB7 410 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 OR5AS1Q8N127 324 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 OR52M1Q8NGK5 317 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 OR2G3Q8NGZ4 309 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 OR51E1Q8TCB6 317 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 DAZLQ92904 295 aaKnown RBP9.36□□□□□ -0.91
CCDC171-208ENST00000486641 REEP6Q96HR9 211 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 OR2M4Q96R27 311 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 CDCA3Q99618 268 aaPredicted RBP9.36□□□□□ -0.91
CCDC171-208ENST00000486641 NIPSNAP3BQ9BS92 247 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 PITPNC1Q9UKF7 332 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 CLDN16Q9Y5I7 305 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 NSG1A0A0A6YYJ2 146 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 ZNF705GA8MUZ8 300 aaPredicted RBP9.36□□□□□ -0.91
CCDC171-208ENST00000486641 SCAF4O95104 1147 aaKnown RBP9.36□□□□□ -0.91
CCDC171-208ENST00000486641 AMBPP02760 352 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 CLPSP04118 112 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 FUT3P21217 361 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 MDKP21741 143 aaPredicted RBP9.36□□□□□ -0.91
CCDC171-208ENST00000486641 GJA4P35212 333 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 CD200P41217 278 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 NUBP1P53384 320 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 FUT7Q11130 342 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 DEFB110Q30KQ9 67 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 DEGS2Q6QHC5 323 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 LANCL3Q6ZV70 420 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 LYZL2Q7Z4W2 148 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 PLPP5Q8NEB5 264 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 OR51T1Q8NGJ9 327 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 RNASEH2CQ8TDP1 164 aaKnown RBP9.36□□□□□ -0.91
CCDC171-208ENST00000486641 RNF133Q8WVZ7 376 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 VWCEQ96DN2 955 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 SCARF2Q96GP6 870 aaPredicted RBP9.36□□□□□ -0.91
CCDC171-208ENST00000486641 SHDQ96IW2 340 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 ACTR3CQ9C0K3 210 aaPredicted RBP9.36□□□□□ -0.91
CCDC171-208ENST00000486641 TWSG1Q9GZX9 223 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 OR10A2Q9H208 303 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 TCFL5Q9UL49 500 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 CYP8B1Q9UNU6 501 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 WSB1Q9Y6I7 421 aa9.36□□□□□ -0.91
CCDC171-208ENST00000486641 PCNX3Q9H6A9 2034 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 A0A1W2PQU0 124 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 ZNF878C9JN71 531 aa9.35□□□□□ -0.91
CCDC171-208ENST00000486641 PLPP3O14495 311 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms