RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 C10orf35Q96D05 121 aa15.17■□□□□ 0.02
COL1A1-207ENST00000486572 CHST5Q9GZS9 411 aa15.17■□□□□ 0.02
COL1A1-207ENST00000486572 C7orf69Q9H7B7 122 aa15.17■□□□□ 0.02
COL1A1-207ENST00000486572 ERVK-18Q9QC07 812 aa15.17■□□□□ 0.02
COL1A1-207ENST00000486572 LOC105371242A0A075B767 164 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 PQLC2LA1A4F0 135 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 OR4C45A6NMZ5 311 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 H0YHG0 523 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 AKR7A2O43488 359 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 RHBDL1O75783 438 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 GATBO75879 557 aaKnown RBP15.16■□□□□ 0.02
COL1A1-207ENST00000486572 AVPP01185 164 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 GMFBP60983 142 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 ALKBH1Q13686 389 aaKnown RBP15.16■□□□□ 0.02
COL1A1-207ENST00000486572 C1orf229Q6ZS94 237 aaPredicted RBP15.16■□□□□ 0.02
COL1A1-207ENST00000486572 ZNF573Q86YE8 665 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 HAVCR2Q8TDQ0 301 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 AQP3Q92482 292 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 TFAP2CQ92754 450 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 TECTBQ96PL2 329 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 WDR13Q9H1Z4 485 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 KAAG1Q9UBP8 84 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 DNAJB11Q9UBS4 358 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 DIMT1Q9UNQ2 313 aaKnown RBP15.16■□□□□ 0.02
COL1A1-207ENST00000486572 INSIG2Q9Y5U4 225 aa15.16■□□□□ 0.02
COL1A1-207ENST00000486572 H0YJX3 145 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 TMPRSS2O15393 492 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 MYL12AP19105 171 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 HAAOP46952 286 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 GBX2P52951 348 aaPredicted RBP15.15■□□□□ 0.02
COL1A1-207ENST00000486572 PAX2Q02962 417 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 BTNL3Q6UXE8 466 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 C1QL2Q7Z5L3 287 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 ZNF676Q8N7Q3 588 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 ZNF671Q8TAW3 534 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 FBLIM1Q8WUP2 373 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 PP6455Q8WZ26 134 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 SEH1LQ96EE3 360 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 MRI1Q9BV20 369 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 OPN4Q9UHM6 478 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 HHLA2Q9UM44 414 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 SLC7A11Q9UPY5 501 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 SVEP1Q4LDE5 3571 aa15.15■□□□□ 0.02
COL1A1-207ENST00000486572 ARHGAP32A7KAX9 2087 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 IGHV2-70DA0A0C4DH43 119 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 TMEM212A6NML5 194 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 E9PI62 339 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 J3QT63 122 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 SERPINA3P01011 423 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 CCDC159P0C7I6 412 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 ZNF20P17024 532 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 GLRA1P23415 457 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 TGM4P49221 684 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 ETV1P50549 477 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 AQP4P55087 323 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 UBE2V2Q15819 145 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 STUMQ69YW2 141 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 TMPRSS11AQ6ZMR5 421 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 TRMT10AQ8TBZ6 339 aaKnown RBP15.14■□□□□ 0.01
COL1A1-207ENST00000486572 NPRL2Q8WTW4 380 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 RAB40AQ8WXH6 277 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 DACT3Q96B18 629 aaPredicted RBP15.14■□□□□ 0.01
COL1A1-207ENST00000486572 TMEM80Q96HE8 168 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 SMURF1Q9HCE7 757 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 POLDIP2Q9Y2S7 368 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 CAB39Q9Y376 341 aaPredicted RBP15.14■□□□□ 0.01
COL1A1-207ENST00000486572 EXOSC1Q9Y3B2 195 aaKnown RBP15.14■□□□□ 0.01
COL1A1-207ENST00000486572 AUP1Q9Y679 476 aa15.14■□□□□ 0.01
COL1A1-207ENST00000486572 MXRA5Q9NR99 2828 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 WNK2Q9Y3S1 2297 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 FAM230AA0A1W2PPH8 454 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 EFCAB10A6NFE3 127 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 RPSAP08865 295 aaKnown RBP15.13■□□□□ 0.01
COL1A1-207ENST00000486572 PIPP12273 146 aaPredicted RBP15.13■□□□□ 0.01
COL1A1-207ENST00000486572 ADRA2CP18825 462 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 SCGB2A2Q13296 93 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 MED21Q13503 144 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 CNN3Q15417 329 aaKnown RBP15.13■□□□□ 0.01
COL1A1-207ENST00000486572 CD276Q5ZPR3 534 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 LAIR2Q6ISS4 152 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 SLC36A1Q7Z2H8 476 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 POC1AQ8NBT0 407 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 OR51A4Q8NGJ6 313 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 OR13C3Q8NGS6 347 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 OR10AC1Q8NH08 325 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 NANPQ8TBE9 248 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 TMIGD2Q96BF3 282 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 ADAT3Q96EY9 351 aaPredicted RBP15.13■□□□□ 0.01
COL1A1-207ENST00000486572 CCL13Q99616 98 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 COMMD4Q9H0A8 199 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 DNTTIP1Q9H147 329 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 VCX3BQ9H321 246 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 SNTG1Q9NSN8 517 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 CNOT2Q9NZN8 540 aaKnown RBP15.13■□□□□ 0.01
COL1A1-207ENST00000486572 NLKQ9UBE8 527 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 METRNQ9UJH8 293 aa15.13■□□□□ 0.01
COL1A1-207ENST00000486572 NKX6-3A6NJ46 265 aa15.12■□□□□ 0.01
COL1A1-207ENST00000486572 C22orf46C9J442 243 aa15.12■□□□□ 0.01
COL1A1-207ENST00000486572 DVL1O14640 695 aa15.12■□□□□ 0.01
COL1A1-207ENST00000486572 SYNGR1O43759 233 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms