RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 B3GALT5Q9Y2C3 310 aa7.9□□□□□ -1.14
COL12A1-208ENST00000486533 AKAP6Q13023 2319 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 A0A1B0GTI1 187 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 TMEM269A0A1B0GVZ9 245 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 A0A1W2PNV4 684 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 FADS1O60427 444 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 PLGP00747 810 aaPredicted RBP7.89□□□□□ -1.15
COL12A1-208ENST00000486533 IL2RAP01589 272 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 HLA-AP01891 365 aaKnown RBP7.89□□□□□ -1.15
COL12A1-208ENST00000486533 GSTP1P09211 210 aaKnown RBP7.89□□□□□ -1.15
COL12A1-208ENST00000486533 PET100P0DJ07 73 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 CTLA4P16410 223 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 RAB3AP20336 220 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 MPGP29372 298 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 GNALP38405 381 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 H2BFSP57053 126 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 SORDQ00796 357 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 SNTB1Q13884 538 aaKnown RBP7.89□□□□□ -1.15
COL12A1-208ENST00000486533 TMEM81Q6P7N7 255 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 NHLRC1Q6VVB1 395 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 ACOT7LQ6ZUV0 252 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 SEM1Q6ZVN7 128 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 TMED4Q7Z7H5 227 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 SLC25A42Q86VD7 318 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 PLPP7Q8NBV4 271 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 NAXEQ8NCW5 288 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 BVESQ8NE79 360 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 SLC26A10Q8NG04 563 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 OR51A4Q8NGJ6 313 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 OR14L1PQ8NHC6 308 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 DUSP19Q8WTR2 217 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 RNF133Q8WVZ7 376 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 ST8SIA2Q92186 375 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 ZNF837Q96EG3 531 aaPredicted RBP7.89□□□□□ -1.15
COL12A1-208ENST00000486533 TRIB1Q96RU8 372 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 AIFM2Q9BRQ8 373 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 REG4Q9BYZ8 158 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 PRDM14Q9GZV8 571 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 PIGMQ9H3S5 423 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 FANCFQ9NPI8 374 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 C12orf4Q9NQ89 552 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 MRPL22Q9NWU5 206 aaKnown RBP7.89□□□□□ -1.15
COL12A1-208ENST00000486533 SLC22A13Q9Y226 551 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 COA3Q9Y2R0 106 aaPredicted RBP7.89□□□□□ -1.15
COL12A1-208ENST00000486533 EMC9Q9Y3B6 208 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 KIAA1549Q9HCM3 1950 aa7.89□□□□□ -1.15
COL12A1-208ENST00000486533 A0A0B4J2A0 478 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 OR5H14A6NHG9 310 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 H0YC42 278 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 LDLRAD4O15165 306 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 SYT7O43581 403 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 SRSF10O75494 262 aaKnown RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 CBR3O75828 277 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 ZNF250P15622 560 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 PTGDSP41222 190 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 ECI1P42126 302 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 CX3CR1P49238 355 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 ZNF41P51814 821 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 PRKXP51817 358 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 EFNB2P52799 333 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 MFGE8Q08431 387 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 DBPQ10586 325 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 PNLIPRP3Q17RR3 467 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 CDNFQ49AH0 187 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 SCGB2B2Q4G0G5 96 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 THEM4Q5T1C6 240 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 C11orf87Q6NUJ2 197 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 LRFN4Q6PJG9 635 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 ARSKQ6UWY0 536 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 ALKAL2Q6UX46 152 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 TRAPPC6BQ86SZ2 158 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 ARRDC1Q8N5I2 433 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 OR1M1Q8NGA1 313 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 OR2AJ1Q8NGZ0 328 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 AQP3Q92482 292 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 LRRC46Q96FV0 321 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 MRGPRX4Q96LA9 322 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 AMELYQ99218 206 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 SHPKQ9UHJ6 478 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 GDF2Q9UK05 429 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 HRNRQ86YZ3 2850 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 AKAP9Q99996 3911 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 DOCK7Q96N67 2140 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 RAB19A4D1S5 217 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 ZNF878C9JN71 531 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 FTCDNL1E5RQL4 147 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 KDM4BO94953 1096 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 ACTL6AO96019 429 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 FCER2P06734 321 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 PTHLHP12272 177 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 ATF4P18848 351 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 TIMP3P35625 211 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 ASCL1P50553 236 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 SRYQ05066 204 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 DHRS2Q13268 280 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 TAF13Q15543 124 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 ATPAF1Q5TC12 328 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 NSUN5P2Q63ZY6 315 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 ZNF660Q6AZW8 331 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms