RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 RPS4Y2Q8TD47 263 aa11.33□□□□□ -0.6
SOX2-OT-209ENST00000485035 NPRL2Q8WTW4 380 aa11.33□□□□□ -0.6
SOX2-OT-209ENST00000485035 AQP3Q92482 292 aa11.33□□□□□ -0.6
SOX2-OT-209ENST00000485035 RGP1Q92546 391 aaPredicted RBP11.33□□□□□ -0.6
SOX2-OT-209ENST00000485035 FGGYQ96C11 551 aa11.33□□□□□ -0.6
SOX2-OT-209ENST00000485035 C10orf35Q96D05 121 aa11.33□□□□□ -0.6
SOX2-OT-209ENST00000485035 NEIL1Q96FI4 390 aaPredicted RBP11.33□□□□□ -0.6
SOX2-OT-209ENST00000485035 WDR13Q9H1Z4 485 aa11.33□□□□□ -0.6
SOX2-OT-209ENST00000485035 ERVK-18Q9QC07 812 aa11.33□□□□□ -0.6
SOX2-OT-209ENST00000485035 CTSZQ9UBR2 303 aa11.33□□□□□ -0.6
SOX2-OT-209ENST00000485035 MIOXQ9UGB7 285 aa11.33□□□□□ -0.6
SOX2-OT-209ENST00000485035 CDC42EP3Q9UKI2 254 aa11.33□□□□□ -0.6
SOX2-OT-209ENST00000485035 HHLA2Q9UM44 414 aa11.33□□□□□ -0.6
SOX2-OT-209ENST00000485035 LRCH1Q9Y2L9 728 aa11.33□□□□□ -0.6
SOX2-OT-209ENST00000485035 SVEP1Q4LDE5 3571 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 ZFHX3Q15911 3703 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 IGKV1-27A0A075B6S5 117 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 IGKV1-9A0A0C4DH69 117 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 TRBV2A0A0J9YWF9 115 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 SYNGR1O43759 233 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 FOXH1O75593 365 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 CCDC159P0C7I6 412 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 CPT2P23786 658 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 HAAOP46952 286 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 HSPA13P48723 471 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 PITPNBP48739 271 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 DOC2BQ14184 412 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 CDK5R1Q15078 307 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 KCNJ8Q15842 424 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 CHRFAM7AQ494W8 412 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 CCDC58Q4VC31 144 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 ESCO2Q56NI9 601 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 ZNF841Q6ZN19 808 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 STX19Q8N4C7 294 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 OR8B3Q8NGG8 313 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 OR13C3Q8NGS6 347 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 OR5AK2Q8NH90 309 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 HAVCR2Q8TDQ0 301 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 GATAD2BQ8WXI9 593 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 PP6455Q8WZ26 134 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 SGCDQ92629 289 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 OR8B2Q96RD0 313 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 SHARPINQ9H0F6 387 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 TRIM36Q9NQ86 728 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 MMP26Q9NRE1 261 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 PAK1IP1Q9NWT1 392 aaPredicted RBP11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 CHCHD3Q9NX63 227 aaKnown RBP11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 BABAM2Q9NXR7 383 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 POLR3KQ9Y2Y1 108 aaPredicted RBP11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 BOLA1Q9Y3E2 137 aa11.32□□□□□ -0.6
SOX2-OT-209ENST00000485035 HIVEP2P31629 2446 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 YLPM1P49750 1951 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 FAM230AA0A1W2PPH8 454 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 TRAPPC2LH3BP13 241 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 J3QT63 122 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 FCN3O75636 299 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 GATBO75879 557 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 MUC1P15941 1255 aaPredicted RBP11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 ZNF20P17024 532 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 VHLP40337 213 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 MED21Q13503 144 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 MICBQ29980 383 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 RPL22L1Q6P5R6 122 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 UTS2BQ765I0 119 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 NLRC3Q7RTR2 1065 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 ANGPTL5Q86XS5 388 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 ZNF573Q86YE8 665 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 CALHM1Q8IU99 346 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 SSBP3Q9BWW4 388 aaPredicted RBP11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 BEX2Q9BXY8 128 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 COMMD4Q9H0A8 199 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 SMURF1Q9HCE7 757 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 SNTG1Q9NSN8 517 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 LPAR3Q9UBY5 353 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 SLC7A11Q9UPY5 501 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 PCDHGB5Q9Y5G0 923 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 ABCA1O95477 2261 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 TLN2Q9Y4G6 2542 aa11.31□□□□□ -0.6
SOX2-OT-209ENST00000485035 PPIAL4CA0A0B4J2A2 164 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 A0A0G2JMP0 313 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 A0A0X1KG70 313 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 A0A1B0GW55 424 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 PTGES3LE9PB15 166 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 OGG1O15527 345 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 ADAM20O43506 726 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 NDUFA2O43678 99 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 SERPINA3P01011 423 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 AVPP01185 164 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 TFF1P04155 84 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 CDK1P06493 297 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 DUX4L2P0CJ85 424 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 DUX4L3P0CJ86 424 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 DUX4L4P0CJ87 422 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 DUX4L5P0CJ88 424 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 DUX4L6P0CJ89 424 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 DUX4L7P0CJ90 424 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 AMY2BP19961 511 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 PCMT1P22061 227 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 MPZP25189 248 aa11.3□□□□□ -0.6
SOX2-OT-209ENST00000485035 GNB2P62879 340 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms