RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 ZNF701Q9NV72 531 aaPredicted RBP17.35■□□□□ 0.37
RPUSD3-216ENST00000484134 B3GAT1Q9P2W7 334 aa17.35■□□□□ 0.37
RPUSD3-216ENST00000484134 VDAC3Q9Y277 283 aa17.35■□□□□ 0.37
RPUSD3-216ENST00000484134 MSTNO14793 375 aa17.34■□□□□ 0.37
RPUSD3-216ENST00000484134 SEMA4FO95754 770 aa17.34■□□□□ 0.37
RPUSD3-216ENST00000484134 THEGLP0DJG4 465 aa17.34■□□□□ 0.37
RPUSD3-216ENST00000484134 SP6Q3SY56 376 aa17.34■□□□□ 0.37
RPUSD3-216ENST00000484134 SULF2Q8IWU5 870 aa17.34■□□□□ 0.37
RPUSD3-216ENST00000484134 ZNF441Q8N8Z8 693 aa17.34■□□□□ 0.37
RPUSD3-216ENST00000484134 HPSE2Q8WWQ2 592 aa17.34■□□□□ 0.37
RPUSD3-216ENST00000484134 GINS3Q9BRX5 216 aa17.34■□□□□ 0.37
RPUSD3-216ENST00000484134 LRRC61Q9BV99 259 aa17.34■□□□□ 0.37
RPUSD3-216ENST00000484134 SLC35B3Q9H1N7 401 aa17.34■□□□□ 0.37
RPUSD3-216ENST00000484134 PLEKHA2Q9HB19 425 aa17.34■□□□□ 0.37
RPUSD3-216ENST00000484134 LUZP4Q9P127 313 aa17.34■□□□□ 0.37
RPUSD3-216ENST00000484134 ADAMTS9Q9P2N4 1935 aa17.34■□□□□ 0.37
RPUSD3-216ENST00000484134 ZDHHC8Q9ULC8 765 aa17.34■□□□□ 0.37
RPUSD3-216ENST00000484134 CRYM-AS1A6NIL9 109 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 ZNF878C9JN71 531 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 H3BML4 177 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 XRCC2O43543 280 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 ZNF205O95201 554 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 DIRAS3O95661 229 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 CA3P07451 260 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 MAS1LP35410 378 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 PPP1CCP36873 323 aaKnown RBP17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 PYY3Q5JQD4 70 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 HEPN1Q6WQI6 88 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 DTX1Q86Y01 620 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 SGPP2Q8IWX5 399 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 RARRES2Q99969 163 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 SERINC1Q9NRX5 453 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 POLR1DQ9Y2S0 133 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 DMRT1Q9Y5R6 373 aa17.33■□□□□ 0.37
RPUSD3-216ENST00000484134 NCOA6Q14686 2063 aaPredicted RBP17.33■□□□□ 0.36
RPUSD3-216ENST00000484134 NPIPB13A6NJU9 1138 aa17.33■□□□□ 0.36
RPUSD3-216ENST00000484134 ZNF729A6NN14 1252 aaPredicted RBP17.33■□□□□ 0.36
RPUSD3-216ENST00000484134 NPIPB4C9JG80 1138 aa17.33■□□□□ 0.36
RPUSD3-216ENST00000484134 GIMD1P0DJR0 217 aa17.33■□□□□ 0.36
RPUSD3-216ENST00000484134 SLC35A1P78382 337 aa17.33■□□□□ 0.36
RPUSD3-216ENST00000484134 KISS1Q15726 138 aa17.33■□□□□ 0.36
RPUSD3-216ENST00000484134 FAM57BQ71RH2 274 aa17.33■□□□□ 0.36
RPUSD3-216ENST00000484134 KCNJ16Q9NPI9 418 aa17.33■□□□□ 0.36
RPUSD3-216ENST00000484134 SUSD2Q9UGT4 822 aa17.33■□□□□ 0.36
RPUSD3-216ENST00000484134 RFNGQ9Y644 331 aa17.33■□□□□ 0.36
RPUSD3-216ENST00000484134 EFNA2O43921 213 aa17.32■□□□□ 0.36
RPUSD3-216ENST00000484134 IFNA21P01568 189 aa17.32■□□□□ 0.36
RPUSD3-216ENST00000484134 HOXA5P20719 270 aa17.32■□□□□ 0.36
RPUSD3-216ENST00000484134 SERPINA2P20848 420 aa17.32■□□□□ 0.36
RPUSD3-216ENST00000484134 CTHP32929 405 aa17.32■□□□□ 0.36
RPUSD3-216ENST00000484134 C6orf201Q7Z4U5 140 aa17.32■□□□□ 0.36
RPUSD3-216ENST00000484134 C1QL4Q86Z23 238 aa17.32■□□□□ 0.36
RPUSD3-216ENST00000484134 PNRC2Q9NPJ4 139 aaKnown RBP17.32■□□□□ 0.36
RPUSD3-216ENST00000484134 TRIOO75962 3097 aa17.32■□□□□ 0.36
RPUSD3-216ENST00000484134 OR2C1O95371 312 aa17.32■□□□□ 0.36
RPUSD3-216ENST00000484134 PRH1P02810 166 aa17.32■□□□□ 0.36
RPUSD3-216ENST00000484134 OPN1LWP04000 364 aa17.32■□□□□ 0.36
RPUSD3-216ENST00000484134 OR1N1Q8NGS0 311 aa17.32■□□□□ 0.36
RPUSD3-216ENST00000484134 MR1Q95460 341 aa17.32■□□□□ 0.36
RPUSD3-216ENST00000484134 PUS1Q9Y606 427 aaKnown RBP eCLIP17.32■□□□□ 0.36
RPUSD3-216ENST00000484134 TCRBV21S2A2A0A5A6 115 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 LIPT2A6NK58 231 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 IFNA17P01571 189 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 CTSDP07339 412 aaPredicted RBP17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 GABRG2P18507 467 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 P2RY1P47900 373 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 RAB2AP61019 212 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 NHLH2Q02577 135 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 CDCP2Q5VXM1 449 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 PLXDC2Q6UX71 529 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 ZNF574Q6ZN55 896 aaPredicted RBP17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 HSD17B11Q8NBQ5 300 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 OR2AJ1Q8NGZ0 328 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 OR14K1Q8NGZ2 314 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 TMEM234Q8WY98 164 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 MOB1AQ9H8S9 216 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 E5RGE8 158 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 STMND1H3BQB6 276 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 WRBO00258 174 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 LINC01565O15544 149 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 RAMP1O60894 148 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 CCL1P22362 96 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 APOBEC1P41238 236 aaKnown RBP17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 KIAA0141Q14154 515 aaPredicted RBP17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 LANCL3Q6ZV70 420 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 INTS12Q96CB8 462 aaKnown RBP17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 NSG2Q9Y328 171 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 MMP24Q9Y5R2 645 aa17.31■□□□□ 0.36
RPUSD3-216ENST00000484134 ZNF727A8MUV8 499 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 H3BMH7 237 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 GLI4P10075 376 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 RAB5CP51148 216 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 SUCLG1P53597 346 aaKnown RBP17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 FBXW4P57775 412 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 CCL20P78556 96 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 FOXF1Q12946 379 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 CARD17Q5XLA6 110 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 LYZL2Q7Z4W2 148 aa17.3■□□□□ 0.36
RPUSD3-216ENST00000484134 REEP6Q96HR9 211 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms