RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 TUBG1P23258 451 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 HOXC12P31275 282 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 UCP2P55851 309 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 PPP1CBP62140 327 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 PNLIPRP3Q17RR3 467 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 PCGF3Q3KNV8 242 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 FTMTQ8N4E7 242 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 CHST4Q8NCG5 386 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 OR5A2Q8NGI9 324 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 HPSE2Q8WWQ2 592 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 POM121Q96HA1 1249 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 ZMAT3Q9HA38 289 aaKnown RBP12.07□□□□□ -0.48
CLK3-204ENST00000483723 TUBG2Q9NRH3 451 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 IGKV1-12A0A0C4DH73 117 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 HMX3A6NHT5 357 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 A8MXE2 369 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 C1QTNF9BB2RNN3 333 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 MFNGO00587 321 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 AGFG2O95081 481 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 IGKV1D-12P01611 117 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 C1QTNF9P0C862 333 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 TPRP12270 2363 aaKnown RBP12.06□□□□□ -0.48
CLK3-204ENST00000483723 HIST1H1DP16402 221 aaKnown RBP12.06□□□□□ -0.48
CLK3-204ENST00000483723 OPRM1P35372 400 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 CCR6P51684 374 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 CARTPTQ16568 116 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 TATDN3Q17R31 274 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 C3orf36Q3SXR2 165 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 TIMM23BQ5SRD1 257 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 UNQ6494/PRO21346Q6UXR6 183 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 C3P1Q6ZMU1 363 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 ZDHHC23Q8IYP9 409 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 OR51T1Q8NGJ9 327 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 OR10K1Q8NGX5 313 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 RAB3CQ96E17 227 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 MRPS24Q96EL2 167 aaKnown RBP12.06□□□□□ -0.48
CLK3-204ENST00000483723 Q96M66 194 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 PAPOLGQ9BWT3 736 aaKnown RBP12.06□□□□□ -0.48
CLK3-204ENST00000483723 PIGMQ9H3S5 423 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 MOV10Q9HCE1 1003 aaKnown RBP12.06□□□□□ -0.48
CLK3-204ENST00000483723 ANAPC10Q9UM13 185 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 CFAP47Q6ZTR5 3102 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 AKR7A2O43488 359 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 SPRY1O43609 319 aaPredicted RBP12.06□□□□□ -0.48
CLK3-204ENST00000483723 ANGPTL7O43827 346 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 SSX5O60225 188 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 CA11O75493 328 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 CD74P04233 296 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 AKAIN1P0CW23 69 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 RAC2P15153 192 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 GNB3P16520 340 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 SERPINA2P20848 420 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 CPT2P23786 658 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 FAUP35544 74 aaKnown RBP12.06□□□□□ -0.48
CLK3-204ENST00000483723 TAS2R19P59542 299 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 PRR30Q53SZ7 412 aaPredicted RBP12.06□□□□□ -0.48
CLK3-204ENST00000483723 SFRP4Q6FHJ7 346 aaPredicted RBP12.06□□□□□ -0.48
CLK3-204ENST00000483723 FJX1Q86VR8 437 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 SAXO1Q8IYX7 474 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 OR4C16Q8NGL9 310 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 OR5P3Q8WZ94 311 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 ACTR6Q9GZN1 396 aa12.06□□□□□ -0.48
CLK3-204ENST00000483723 ASPMQ8IZT6 3477 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 A0A0G2JNJ9 132 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 MEIS3P1A6NDR6 274 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 ANKRD30BLA7E2S9 258 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 LILRA1O75019 489 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 HNRNPCP07910 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
CLK3-204ENST00000483723 CECR9P0C854 216 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 GTF2F2P13984 249 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 IL32P24001 234 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 RCVRNP35243 200 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 CD300CQ08708 224 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 ARL6IP1Q15041 203 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 RSU1Q15404 277 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 OR2T2Q6IF00 324 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 STEAP1BQ6NZ63 245 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 RTN4RL2Q86UN3 420 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 TMEM200AQ86VY9 491 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 CALHM1Q8IU99 346 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 OR56B4Q8NH76 319 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 C1QTNF6Q9BXI9 259 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 OR2J1Q9GZK6 312 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 PCDHB16Q9NRJ7 776 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 NUDT15Q9NV35 164 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 ZNF629Q9UEG4 869 aaPredicted RBP12.05□□□□□ -0.48
CLK3-204ENST00000483723 Q9UFV3 132 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 ALG5Q9Y673 324 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 MGAQ8IWI9 3026 aa12.05□□□□□ -0.48
CLK3-204ENST00000483723 CHD8Q9HCK8 2581 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 IGHV1-18A0A0C4DH31 117 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 C7orf66A4D0T2 115 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 HTR3BO95264 441 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 DHFRP00374 187 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 H2AFB2P0C5Z0 115 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 NAT1P18440 290 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 MECP2P51608 486 aaKnown RBP12.04□□□□□ -0.48
CLK3-204ENST00000483723 MRGPRGQ86SM5 289 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 C1orf174Q8IYL3 243 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 KDF1Q8NAX2 398 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms