RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 PGCP20142 388 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 SLC6A8P48029 635 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 CAMLGP49069 296 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 IAH1Q2TAA2 248 aaPredicted RBP12.6□□□□□ -0.39
COL9A2-207ENST00000482722 PLAC9Q5JTB6 97 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 OPN5Q6U736 354 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 SPNS3Q6ZMD2 512 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 GALNTL5Q7Z4T8 443 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 PEG10Q86TG7 708 aaKnown RBP12.6□□□□□ -0.39
COL9A2-207ENST00000482722 COMMD1Q8N668 190 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 CCDC54Q8NEL0 328 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 SLC35B3Q9H1N7 401 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 PPP4R1LQ9P1A2 415 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 MEMO1Q9Y316 297 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 TLCD2A6NGC4 264 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 SOCS1O15524 211 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 RAD51DO75771 328 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 ISG15P05161 165 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 RAB1AP62820 205 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 GAMTQ14353 236 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 PDZD11Q5EBL8 140 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 GFI1BQ5VTD9 330 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 C1orf140Q5VVS0 124 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 RPUSD3Q6P087 351 aaKnown RBP12.59□□□□□ -0.39
COL9A2-207ENST00000482722 LANCL3Q6ZV70 420 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 HIST2H3AQ71DI3 136 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 REC114Q7Z4M0 266 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 STX12Q86Y82 276 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 SOX7Q9BT81 388 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 CFAP47Q6ZTR5 3102 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 ZNF727A8MUV8 499 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 MASP2O00187 686 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 MPIG6BO95866 241 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 IGKV3-11P04433 115 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 DANCRP0C864 163 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 SURF2Q15527 256 aaPredicted RBP12.59□□□□□ -0.39
COL9A2-207ENST00000482722 SGCBQ16585 318 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 AADACL3Q5VUY0 350 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 ZNF529Q6P280 563 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 SLC22A24Q8N4F4 322 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 JSRP1Q96MG2 331 aaPredicted RBP12.59□□□□□ -0.39
COL9A2-207ENST00000482722 PRO1933Q9H354 126 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 TXNIPQ9H3M7 391 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 COPS7AQ9UBW8 275 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 LSM5Q9Y4Y9 91 aaKnown RBP12.59□□□□□ -0.39
COL9A2-207ENST00000482722 ADAMTS9Q9P2N4 1935 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 ARGFXA6NJG6 315 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 RAMP1O60894 148 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 AHSA1O95433 338 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 OPN1LWP04000 364 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 H2BFMP0C1H6 154 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 SLC2A1P11166 492 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 HSD11B1P28845 292 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 FASLGP48023 281 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 RSU1Q15404 277 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 C14orf28Q4W4Y0 310 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 LCN10Q6JVE6 187 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 UBAC2Q8NBM4 344 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 OR5H2Q8NGV7 314 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 MUCL1Q96DR8 90 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 PRRX2Q99811 253 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 TGIF2Q9GZN2 237 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 LPAR5Q9H1C0 372 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 C19orf12Q9NSK7 152 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 ZDHHC8Q9ULC8 765 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 VDAC3Q9Y277 283 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 LAMA5O15230 3695 aa12.59□□□□□ -0.39
COL9A2-207ENST00000482722 TMEM14DPA8MWL7 114 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 SYT7O43581 403 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 GDF9O60383 454 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 KNG1P01042 644 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 FOSL2P15408 326 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 ZNF84P51523 738 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 PCK2Q16822 640 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 ZNF674Q2M3X9 581 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 FAM69BQ5VUD6 431 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 COMMD2Q86X83 199 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 ST6GALNAC5Q9BVH7 336 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 WWTR1Q9GZV5 400 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 MED29Q9NX70 200 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 LUZP4Q9P127 313 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 SHISA8B8ZZ34 492 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 DEDDO75618 318 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 FOLR1P15328 257 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 DDTP30046 118 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 TAS2R60P59551 318 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 ZNF343Q6P1L6 599 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 CPNE4Q96A23 557 aaPredicted RBP12.58□□□□□ -0.4
COL9A2-207ENST00000482722 NTNG2Q96CW9 530 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 S100A13Q99584 98 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 NUDT22Q9BRQ3 303 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 GPR61Q9BZJ8 451 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 ANAPC10Q9UM13 185 aa12.58□□□□□ -0.4
COL9A2-207ENST00000482722 SCGB1D2O95969 90 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 PRH1P02810 166 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 POLR2HP52434 150 aaKnown RBP12.57□□□□□ -0.4
COL9A2-207ENST00000482722 LHFPL1Q86WI0 220 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 ZNF610Q8N9Z0 462 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 SLC26A10Q8NG04 563 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 OR1L3Q8NH93 324 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms