RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 FN1P02751 2386 aaKnown RBP17.5■□□□□ 0.39
SEC13-217ENST00000482647 PQLC2LA1A4F0 135 aa17.49■□□□□ 0.39
SEC13-217ENST00000482647 PTGES3LE9PB15 166 aa17.49■□□□□ 0.39
SEC13-217ENST00000482647 F5H0A9 414 aaPredicted RBP17.49■□□□□ 0.39
SEC13-217ENST00000482647 SLC1A7O00341 560 aa17.49■□□□□ 0.39
SEC13-217ENST00000482647 MUC1P15941 1255 aaPredicted RBP17.49■□□□□ 0.39
SEC13-217ENST00000482647 C21orf33P30042 268 aaPredicted RBP17.49■□□□□ 0.39
SEC13-217ENST00000482647 MICBQ29980 383 aa17.49■□□□□ 0.39
SEC13-217ENST00000482647 ESCO2Q56NI9 601 aa17.49■□□□□ 0.39
SEC13-217ENST00000482647 TEX36Q5VZQ5 186 aa17.49■□□□□ 0.39
SEC13-217ENST00000482647 HAGHLQ6PII5 290 aaPredicted RBP17.49■□□□□ 0.39
SEC13-217ENST00000482647 ADAT3Q96EY9 351 aaPredicted RBP17.49■□□□□ 0.39
SEC13-217ENST00000482647 NEIL1Q96FI4 390 aaPredicted RBP17.49■□□□□ 0.39
SEC13-217ENST00000482647 PDCD1LG2Q9BQ51 273 aa17.49■□□□□ 0.39
SEC13-217ENST00000482647 CDC42EP3Q9UKI2 254 aa17.49■□□□□ 0.39
SEC13-217ENST00000482647 RAB26Q9ULW5 256 aa17.49■□□□□ 0.39
SEC13-217ENST00000482647 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.48■□□□□ 0.392e-9■■□□□ 12
SEC13-217ENST00000482647 SRRM5B3KS81 715 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 CRLF1O75462 422 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 EGR1P18146 543 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 HAAOP46952 286 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 FUT6P51993 359 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 RIPPLY3P57055 190 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 LCN2P80188 198 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 UBE2V2Q15819 145 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 OR8B3Q8NGG8 313 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 OR51A4Q8NGJ6 313 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 OR10AC1Q8NH08 325 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 AQP3Q92482 292 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 C12orf43Q96C57 262 aaKnown RBP17.48■□□□□ 0.39
SEC13-217ENST00000482647 OR8B2Q96RD0 313 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 BEX2Q9BXY8 128 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 ERGIC3Q9Y282 383 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 LRCH1Q9Y2L9 728 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 TPRKBQ9Y3C4 175 aa17.48■□□□□ 0.39
SEC13-217ENST00000482647 FAM230AA0A1W2PPH8 454 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 MYL12BO14950 172 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 OGG1O15527 345 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 CDK1P06493 297 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 ZFP36P26651 326 aaKnown RBP17.47■□□□□ 0.39
SEC13-217ENST00000482647 CDK5R1Q15078 307 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 CNN3Q15417 329 aaKnown RBP17.47■□□□□ 0.39
SEC13-217ENST00000482647 CR1LQ2VPA4 569 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 FAM120AOSQ5T036 256 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 RNLSQ5VYX0 342 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 XAF1Q6GPH4 301 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 LYPD2Q6UXB3 125 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 UTS2BQ765I0 119 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 FAM90A1Q86YD7 464 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 ZNF485Q8NCK3 441 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 CNBD2Q96M20 576 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 SHARPINQ9H0F6 387 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 LPAR3Q9UBY5 353 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 DHDHQ9UQ10 334 aa17.47■□□□□ 0.39
SEC13-217ENST00000482647 IGHV3OR15-7A0A075B7D8 119 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 A0A0G2JMP0 313 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 A0A0X1KG70 313 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.46■□□□□ 0.39
SEC13-217ENST00000482647 J3QT63 122 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 TNFRSF13BO14836 293 aaPredicted RBP17.46■□□□□ 0.39
SEC13-217ENST00000482647 AKR7A2O43488 359 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 RHBDL1O75783 438 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 GYPAP02724 150 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 HNF1AP20823 631 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 GATA3P23771 443 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 PITPNBP48739 271 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 GMFBP60983 142 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 SEC61A1P61619 476 aaKnown RBP17.46■□□□□ 0.39
SEC13-217ENST00000482647 CHRFAM7AQ494W8 412 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 FAHD2BQ6P2I3 314 aaPredicted RBP17.46■□□□□ 0.39
SEC13-217ENST00000482647 NANOGP1Q8N7R0 232 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 OR4M2Q8NGB6 313 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 TRMT10AQ8TBZ6 339 aaKnown RBP17.46■□□□□ 0.39
SEC13-217ENST00000482647 NPRL2Q8WTW4 380 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 TSEN15Q8WW01 171 aaKnown RBP17.46■□□□□ 0.39
SEC13-217ENST00000482647 FAHD2AQ96GK7 314 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 SSBP3Q9BWW4 388 aaPredicted RBP17.46■□□□□ 0.39
SEC13-217ENST00000482647 DNAJB11Q9UBS4 358 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 POLDIP2Q9Y2S7 368 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 PCDHGB5Q9Y5G0 923 aa17.46■□□□□ 0.39
SEC13-217ENST00000482647 ABCA2Q9BZC7 2435 aa17.46■□□□□ 0.38
SEC13-217ENST00000482647 SVEP1Q4LDE5 3571 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 PPIAL4CA0A0B4J2A2 164 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 A8MXK9 166 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 PHF1O43189 567 aaPredicted RBP17.45■□□□□ 0.38
SEC13-217ENST00000482647 ADAM20O43506 726 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 OCM2P0CE71 109 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 OCMP0CE72 109 aaPredicted RBP17.45■□□□□ 0.38
SEC13-217ENST00000482647 ATF1P18846 271 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 PRKACBP22694 351 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 GLRA1P23415 457 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 WNT4P56705 351 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 TAS2R43P59537 309 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 GNB2P62879 340 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 DNAAF1Q8NEP3 725 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 OR5D14Q8NGL3 314 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 RPS4Y2Q8TD47 263 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 GPR148Q8TDV2 347 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 SMIM19Q96E16 107 aa17.45■□□□□ 0.38
SEC13-217ENST00000482647 BORCS8Q96FH0 119 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms