RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 BARX1Q9HBU1 254 aaPredicted RBP11.18□□□□□ -0.62
HDAC1-208ENST00000482310 NEK6Q9HC98 313 aa11.18□□□□□ -0.62
HDAC1-208ENST00000482310 GCM1Q9NP62 436 aa11.18□□□□□ -0.62
HDAC1-208ENST00000482310 IGKV1-27A0A075B6S5 117 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 PQLC2LA1A4F0 135 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 SMIM30A4D0T7 59 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 ISPDA4D126 451 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 OR5B21A6NL26 309 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 CDIPTO14735 213 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 PPIHO43447 177 aaKnown RBP11.17□□□□□ -0.62
HDAC1-208ENST00000482310 SPRY1O43609 319 aaPredicted RBP11.17□□□□□ -0.62
HDAC1-208ENST00000482310 SYNGR1O43759 233 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 PSMA1P25786 263 aaKnown RBP11.17□□□□□ -0.62
HDAC1-208ENST00000482310 CALRP27797 417 aaKnown RBP11.17□□□□□ -0.62
HDAC1-208ENST00000482310 CD80P33681 288 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 PMELP40967 661 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 FUT6P51993 359 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 CLEC12BQ2HXU8 276 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 HFEQ30201 348 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 HSD17B12Q53GQ0 312 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 DDI2Q5TDH0 399 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 C22orf42Q6IC83 251 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 CLEC2AQ6UVW9 174 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 UTS2BQ765I0 119 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 DNAAF1Q8NEP3 725 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 OR52N4Q8NGI2 321 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 OR5A2Q8NGI9 324 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 GPER1Q99527 375 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 FAM192AQ9GZU8 254 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 SCOCQ9UIL1 159 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 STUB1Q9UNE7 303 aa11.17□□□□□ -0.62
HDAC1-208ENST00000482310 DOCK11Q5JSL3 2073 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 CCDC168Q8NDH2 2452 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 LRP5LA4QPB2 252 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 TMEM210A6NLX4 147 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 MAGEB3O15480 346 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 GPX5O75715 221 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 RHBDL1O75783 438 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 IRF2P14316 349 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 JUNBP17275 347 aaPredicted RBP11.16□□□□□ -0.62
HDAC1-208ENST00000482310 EGR1P18146 543 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 PRKACBP22694 351 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 BDKRB2P30411 391 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 CRYBB2P43320 205 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 RBP2P50120 134 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 PDLIM4P50479 330 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 ATP1B3P54709 279 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 MTCP1P56278 107 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 LSM3P62310 102 aaKnown RBP11.16□□□□□ -0.62
HDAC1-208ENST00000482310 LHFPL2Q6ZUX7 228 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 CALHM1Q8IU99 346 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 OR11L1Q8NGX0 322 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 LRRC29Q8WV35 223 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 FAM168AQ92567 244 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 SLAMF9Q96A28 289 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 ZNF488Q96MN9 340 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 TECTBQ96PL2 329 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 OR51I2Q9H344 312 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 RNF167Q9H6Y7 350 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 TCF7L1Q9HCS4 588 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 TMEM106BQ9NUM4 274 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 SSR3Q9UNL2 185 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 MED13LQ71F56 2210 aa11.16□□□□□ -0.62
HDAC1-208ENST00000482310 YLPM1P49750 1951 aaKnown RBP11.16□□□□□ -0.62
HDAC1-208ENST00000482310 IGHV3OR15-7A0A075B7D8 119 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 IGHV4-30-2A0A087WSY4 118 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 CLDN25C9JDP6 229 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 AKR7A2O43488 359 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 ANGPTL7O43827 346 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 RP2O75695 350 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 SC5DO75845 299 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 UCHL1P09936 223 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 CALCBP10092 127 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 PAX1P15863 534 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 IGFBP3P17936 291 aaPredicted RBP11.15□□□□□ -0.62
HDAC1-208ENST00000482310 FSTP19883 344 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 TGFBR1P36897 503 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 SFRP4Q6FHJ7 346 aaPredicted RBP11.15□□□□□ -0.62
HDAC1-208ENST00000482310 WDR82Q6UXN9 313 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 UNQ9370/PRO34162Q6UXP9 181 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 GPR141Q7Z602 305 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 ZNF573Q86YE8 665 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 C11orf53Q8IXP5 236 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 LRRC75A-AS1Q8N1F1 130 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 JAGN1Q8N5M9 183 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 CELF2-AS1Q8N7Q2 184 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 THRSPQ92748 146 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 ITFG2Q969R8 447 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 SPSB1Q96BD6 273 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 YIPF6Q96EC8 236 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 SEH1LQ96EE3 360 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 Q96MF0 132 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 SLITRK2Q9H156 845 aa11.15□□□□□ -0.62
HDAC1-208ENST00000482310 ELL3Q9HB65 397 aaPredicted RBP11.15□□□□□ -0.62
HDAC1-208ENST00000482310 TXNL4BQ9NX01 149 aaKnown RBP11.15□□□□□ -0.62
HDAC1-208ENST00000482310 TRDV1A0A1B0GX56 115 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 LRRC30A6NM36 301 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 J3QT63 122 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 WNT9BO14905 357 aa11.14□□□□□ -0.63
HDAC1-208ENST00000482310 TFAP2AP05549 437 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms