RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 OR10A2Q9H208 303 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 RGCCQ9H4X1 137 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 LPAR2Q9HBW0 351 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 G6PC2Q9NQR9 355 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 TXNL4BQ9NX01 149 aaKnown RBP10.29□□□□□ -0.76
PTPRF-213ENST00000481019 CKLFQ9UBR5 152 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 PPP1R3CQ9UQK1 317 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 RHBDD3Q9Y3P4 386 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 DNHD1Q96M86 4753 aa10.29□□□□□ -0.76
PTPRF-213ENST00000481019 A0A0U1RQV5 110 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 A0A1B0GVI7 797 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 TMEM178BH3BS89 294 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 PDCD5O14737 125 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 GPX5O75715 221 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 IGLV3-1P01715 115 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 OCM2P0CE71 109 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 CD200P41217 278 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 GZMKP49863 264 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 VBP1P61758 197 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 LSM3P62310 102 aaKnown RBP10.28□□□□□ -0.76
PTPRF-213ENST00000481019 RPS25P62851 125 aaKnown RBP10.28□□□□□ -0.76
PTPRF-213ENST00000481019 ZMYND11Q15326 602 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 OR8G1Q15617 311 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 OR8B8Q15620 311 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 FOXB2Q5VYV0 432 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 UNQ9370/PRO34162Q6UXP9 181 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 LINC00299Q6ZSB3 139 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 IL17RELQ6ZVW7 336 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 C19orf18Q8NEA5 215 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 OR51E1Q8TCB6 317 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 C10orf35Q96D05 121 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 DCSTAMPQ9H295 470 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 ZNF665Q9H7R5 613 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 NEK6Q9HC98 313 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 UFSP2Q9NUQ7 469 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 MRPL15Q9P015 296 aaKnown RBP10.28□□□□□ -0.76
PTPRF-213ENST00000481019 DHDHQ9UQ10 334 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 SLC22A13Q9Y226 551 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 NPTNQ9Y639 398 aa10.28□□□□□ -0.76
PTPRF-213ENST00000481019 SIRT4Q9Y6E7 314 aaPredicted RBP10.28□□□□□ -0.76
PTPRF-213ENST00000481019 ARHGAP32A7KAX9 2087 aa10.27□□□□□ -0.76
PTPRF-213ENST00000481019 TRAV1-2A0A0B4J238 106 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 A0A1B0GTI1 187 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 MEGF11A6BM72 1044 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 A8MV72 311 aaPredicted RBP10.27□□□□□ -0.77
PTPRF-213ENST00000481019 SC5DO75845 299 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 PTBP3O95758 552 aaKnown RBP10.27□□□□□ -0.77
PTPRF-213ENST00000481019 TGFAP01135 160 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 IGHV2-5P01817 119 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 TTRP02766 147 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 TNFRSF1AP19438 455 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 MTNR1BP49286 362 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 SRP9P49458 86 aaKnown RBP10.27□□□□□ -0.77
PTPRF-213ENST00000481019 RORCP51449 518 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 NANOS3P60323 173 aaKnown RBP10.27□□□□□ -0.77
PTPRF-213ENST00000481019 FABP5Q01469 135 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 HSD17B12Q53GQ0 312 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 DMRTC1Q5HYR2 192 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 WDR38Q5JTN6 314 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 C22orf42Q6IC83 251 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 ZNF826PQ6ZT77 177 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 DOK3Q7L591 496 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 C11orf53Q8IXP5 236 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 TSEN15Q8WW01 171 aaKnown RBP10.27□□□□□ -0.77
PTPRF-213ENST00000481019 AP3S1Q92572 193 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 HPS1Q92902 700 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 PDCD1LG2Q9BQ51 273 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 NAA50Q9GZZ1 169 aaKnown RBP10.27□□□□□ -0.77
PTPRF-213ENST00000481019 OPA3Q9H6K4 179 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 TCF7L1Q9HCS4 588 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 SNTG1Q9NSN8 517 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 A3GALT2U3KPV4 340 aa10.27□□□□□ -0.77
PTPRF-213ENST00000481019 ISPDA4D126 451 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 DHRS7CA6NNS2 312 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 SYT7O43581 403 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 GMDSO60547 372 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 GRPP07492 148 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 UCHL1P09936 223 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 GATA4P43694 442 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 RIPPLY3P57055 190 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 SEC61A1P61619 476 aaKnown RBP10.26□□□□□ -0.77
PTPRF-213ENST00000481019 NCS1P62166 190 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 PRIMA1Q86XR5 153 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 PRSS35Q8N3Z0 413 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 LINC01356Q8N9X3 169 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 RPL3LQ92901 407 aaKnown RBP10.26□□□□□ -0.77
PTPRF-213ENST00000481019 RAB1CQ92928 201 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 FAM71F1Q96KD3 344 aaPredicted RBP10.26□□□□□ -0.77
PTPRF-213ENST00000481019 CENPOQ9BU64 300 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 MRI1Q9BV20 369 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 METTL17Q9H7H0 456 aaPredicted RBP10.26□□□□□ -0.77
PTPRF-213ENST00000481019 GPR84Q9NQS5 396 aa10.26□□□□□ -0.77
PTPRF-213ENST00000481019 CCDC59Q9P031 241 aaKnown RBP10.26□□□□□ -0.77
PTPRF-213ENST00000481019 TRBV5-5A0A0J9YX44 114 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 ANKRD30BLA7E2S9 258 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 ZNF850A8MQ14 1090 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 H3BSH0 61 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 P2RY10O00398 339 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 LMX1BO60663 402 aa10.25□□□□□ -0.77
PTPRF-213ENST00000481019 CRLF1O75462 422 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms