RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 KRTAP10-9P60411 292 aa10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 ZP1P60852 638 aa10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 VBP1P61758 197 aa10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 MRPS11P82912 194 aaKnown RBP10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 RIN1Q13671 783 aa10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 KISS1Q15726 138 aa10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 ZNF181Q2M3W8 571 aa10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 C1orf100Q5SVJ3 147 aa10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 GLT8D1Q68CQ7 371 aa10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 USP43Q70EL4 1123 aa10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 OR52N4Q8NGI2 321 aa10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 TRMT10AQ8TBZ6 339 aaKnown RBP10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 NPRL2Q8WTW4 380 aa10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 ITLN1Q8WWA0 313 aa10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 TPK1Q9H3S4 243 aa10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 ZNF701Q9NV72 531 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 RSL24D1Q9UHA3 163 aaKnown RBP10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 EDARQ9UNE0 448 aa10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 LRBAP50851 2863 aa10.62□□□□□ -0.71
TRAPPC12-218ENST00000479897 USF3Q68DE3 2245 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 DYSFO75923 2080 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 APCP25054 2843 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 A0A0G2JK05 382 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 FAM230AA0A1W2PPH8 454 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 A6NHS1 94 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 IFNL4K9M1U5 179 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 SLC17A2O00624 439 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 ACAA1P09110 424 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 SDC2P34741 201 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 ZNF93P35789 620 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 TGFBR1P36897 503 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 CFHR2P36980 270 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 CDKN1AP38936 164 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 RANBP1P43487 201 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 HAAOP46952 286 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 MTCP1P56278 107 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 LSM3P62310 102 aaKnown RBP10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 CCL8P80075 99 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 IL24Q13007 206 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 DMRTC1Q5HYR2 192 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 FAM166AQ6J272 317 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 NR2C2APQ86WQ0 139 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 SAXO1Q8IYX7 474 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 ZCCHC24Q8N2G6 241 aaKnown RBP10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 ZSCAN4Q8NAM6 433 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 PXT1Q8NFP0 134 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 OR10Z1Q8NGY1 313 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 AQP3Q92482 292 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 NINJ1Q92982 152 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 C12orf43Q96C57 262 aaKnown RBP10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 VRK1Q99986 396 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 GCM1Q9NP62 436 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 DECR2Q9NUI1 292 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 POLDIP2Q9Y2S7 368 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 V9GY05 133 aa10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 ANKRD17O75179 2603 aaKnown RBP10.61□□□□□ -0.71
TRAPPC12-218ENST00000479897 NOTOA8MTQ0 251 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 AIPO00170 330 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 NOS1APO75052 506 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 CDRT1O95170 752 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 HPXP02790 462 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 SERPINB10P48595 397 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 PDZK1IP1Q13113 114 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 SPRNQ5BIV9 151 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 PRAMEF6Q5VXH4 476 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 WDR82Q6UXN9 313 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 ASCL4Q6XD76 172 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 CALHM1Q8IU99 346 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 CROCCP3Q8IVE0 287 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 C11orf53Q8IXP5 236 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 JAGN1Q8N5M9 183 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 PNLDC1Q8NA58 520 aaKnown RBP10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 SCCPDHQ8NBX0 429 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 OR6M1Q8NGM8 313 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 NDNFQ8TB73 568 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 SLC25A46Q96AG3 418 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 SPACA5Q96QH8 159 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 GSX2Q9BZM3 304 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 FAM192AQ9GZU8 254 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 DCSTAMPQ9H295 470 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 LIME1Q9H400 295 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 FN3KRPQ9HA64 309 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 RHOFQ9HBH0 211 aa10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 MYOZ1Q9NP98 299 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 AK6Q9Y3D8 172 aaKnown RBP10.6□□□□□ -0.71
TRAPPC12-218ENST00000479897 BAHCC1Q9P281 2608 aa10.59□□□□□ -0.71
TRAPPC12-218ENST00000479897 IFITM5A6NNB3 132 aa10.59□□□□□ -0.71
TRAPPC12-218ENST00000479897 UBBP0CG47 229 aa10.59□□□□□ -0.71
TRAPPC12-218ENST00000479897 RPS19P39019 145 aaKnown RBP10.59□□□□□ -0.71
TRAPPC12-218ENST00000479897 EFNA4P52798 201 aa10.59□□□□□ -0.71
TRAPPC12-218ENST00000479897 CAPZA1P52907 286 aa10.59□□□□□ -0.71
TRAPPC12-218ENST00000479897 OR10A3P58181 314 aa10.59□□□□□ -0.71
TRAPPC12-218ENST00000479897 SPCS2Q15005 226 aa10.59□□□□□ -0.71
TRAPPC12-218ENST00000479897 MPPED2Q15777 294 aa10.59□□□□□ -0.71
TRAPPC12-218ENST00000479897 FOXB2Q5VYV0 432 aa10.59□□□□□ -0.71
TRAPPC12-218ENST00000479897 SFXN4Q6P4A7 337 aa10.59□□□□□ -0.71
TRAPPC12-218ENST00000479897 HAGHLQ6PII5 290 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC12-218ENST00000479897 RNF144BQ7Z419 303 aa10.59□□□□□ -0.71
TRAPPC12-218ENST00000479897 NRGNQ92686 78 aa10.59□□□□□ -0.71
TRAPPC12-218ENST00000479897 HPS1Q92902 700 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms