RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 IGKV1-9A0A0C4DH69 117 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 DHRS7CA6NNS2 312 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 GATCO43716 136 aaKnown RBP18.22■□□□□ 0.51
COL13A1-208ENST00000479733 MBPP02686 304 aaPredicted RBP18.22■□□□□ 0.51
COL13A1-208ENST00000479733 GABRA4P48169 554 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 RAB5CP51148 216 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 RPS23P62266 143 aaKnown RBP18.22■□□□□ 0.51
COL13A1-208ENST00000479733 YPEL5P62699 121 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 OR2AJ1Q8NGZ0 328 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 MFSD8Q8NHS3 518 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 WWTR1Q9GZV5 400 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 LHFPL6Q9Y693 200 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 GABRR1P24046 479 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 NHLH2Q02577 135 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 TMEM92Q6UXU6 159 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 TMEM182Q6ZP80 229 aaPredicted RBP18.22■□□□□ 0.51
COL13A1-208ENST00000479733 ZNF784Q8NCA9 323 aaPredicted RBP18.22■□□□□ 0.51
COL13A1-208ENST00000479733 APCDD1LQ8NCL9 501 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 STMND1H3BQB6 276 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 RAMP1O60894 148 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 SLC35A1P78382 337 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 C14orf28Q4W4Y0 310 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 ZNF383Q8NA42 475 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 SLAMF9Q96A28 289 aa18.22■□□□□ 0.51
COL13A1-208ENST00000479733 IGHV3-20A0A0C4DH32 117 aa18.21■□□□□ 0.51
COL13A1-208ENST00000479733 IFITM10A6NMD0 228 aa18.21■□□□□ 0.51
COL13A1-208ENST00000479733 PMELP40967 661 aa18.21■□□□□ 0.51
COL13A1-208ENST00000479733 NSUN5P2Q63ZY6 315 aa18.21■□□□□ 0.51
COL13A1-208ENST00000479733 ZNF343Q6P1L6 599 aa18.21■□□□□ 0.51
COL13A1-208ENST00000479733 MR1Q95460 341 aa18.21■□□□□ 0.51
COL13A1-208ENST00000479733 PECRQ9BY49 303 aa18.21■□□□□ 0.51
COL13A1-208ENST00000479733 SUSD2Q9UGT4 822 aa18.21■□□□□ 0.51
COL13A1-208ENST00000479733 BORCS7-ASMTA0A0B4J1R7 106 aa18.21■□□□□ 0.51
COL13A1-208ENST00000479733 ZNF729A6NN14 1252 aaPredicted RBP18.21■□□□□ 0.51
COL13A1-208ENST00000479733 THEGLP0DJG4 465 aa18.21■□□□□ 0.51
COL13A1-208ENST00000479733 SOHLH1Q5JUK2 328 aa18.21■□□□□ 0.51
COL13A1-208ENST00000479733 TMEM240Q5SV17 173 aa18.21■□□□□ 0.51
COL13A1-208ENST00000479733 ZNF283Q8N7M2 679 aa18.21■□□□□ 0.51
COL13A1-208ENST00000479733 MCTS1Q9ULC4 181 aaKnown RBP18.21■□□□□ 0.51
COL13A1-208ENST00000479733 POU2F2P09086 479 aa18.2■□□□□ 0.5
COL13A1-208ENST00000479733 RRADP55042 308 aa18.2■□□□□ 0.5
COL13A1-208ENST00000479733 HSD11B2P80365 405 aa18.2■□□□□ 0.5
COL13A1-208ENST00000479733 DEFA6Q01524 100 aa18.2■□□□□ 0.5
COL13A1-208ENST00000479733 LMAN1LQ9HAT1 526 aa18.2■□□□□ 0.5
COL13A1-208ENST00000479733 DMRT1Q9Y5R6 373 aa18.2■□□□□ 0.5
COL13A1-208ENST00000479733 CPAMD8Q8IZJ3 1885 aa18.2■□□□□ 0.5
COL13A1-208ENST00000479733 E9PLN8 166 aa18.2■□□□□ 0.5
COL13A1-208ENST00000479733 GPX4P36969 197 aaPredicted RBP18.2■□□□□ 0.5
COL13A1-208ENST00000479733 FXYD4P59646 89 aa18.2■□□□□ 0.5
COL13A1-208ENST00000479733 RHEBQ15382 184 aa18.2■□□□□ 0.5
COL13A1-208ENST00000479733 KISS1Q15726 138 aa18.2■□□□□ 0.5
COL13A1-208ENST00000479733 COPS7AQ9UBW8 275 aa18.2■□□□□ 0.5
COL13A1-208ENST00000479733 A0A1W2PQD3 144 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 CA3P07451 260 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 S100A2P29034 98 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 GALNSP34059 522 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 FZD2Q14332 565 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 C1orf189Q5VU69 101 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 LYZL2Q7Z4W2 148 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 SUMF2Q8NBJ7 301 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 PIGQQ9BRB3 760 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 MESP1Q9BRJ9 268 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 CHST11Q9NPF2 352 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 CUTCQ9NTM9 273 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 PIGPP57054 158 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 CLRN1P58418 232 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 ZNF674Q2M3X9 581 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 RHBDD1Q8TEB9 315 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 INTS12Q96CB8 462 aaKnown RBP18.19■□□□□ 0.5
COL13A1-208ENST00000479733 SHDQ96IW2 340 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 PADI1Q9ULC6 663 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 TCRBV21S2A2A0A5A6 115 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 RHPN2P1A8MT19 583 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 ATXN7O15265 892 aaPredicted RBP18.19■□□□□ 0.5
COL13A1-208ENST00000479733 SEMA4FO95754 770 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 OPRM1P35372 400 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 RABIFP47224 123 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 CCL20P78556 96 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 PHLDA2Q53GA4 152 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 SGK3Q96BR1 496 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 DOK5Q9P104 306 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 TUBD1Q9UJT1 453 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 B3GALT1Q9Y5Z6 326 aa18.19■□□□□ 0.5
COL13A1-208ENST00000479733 PCDH15Q96QU1 1955 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 SEC11BP0C7V7 166 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 TMEM225BP0DP42 221 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 FBXW4P57775 412 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 OGFOD3Q6PK18 319 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 HEPN1Q6WQI6 88 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 LANCL3Q6ZV70 420 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 OIT3Q8WWZ8 545 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 PIGTQ969N2 578 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 S100A13Q99584 98 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 ABHD14AQ9BUJ0 271 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 PBDC1Q9BVG4 233 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 CRISPLD2Q9H0B8 497 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 PLEKHA2Q9HB19 425 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 SERINC1Q9NRX5 453 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 PLEKHJ1Q9NW61 149 aa18.18■□□□□ 0.5
COL13A1-208ENST00000479733 HDGFL3Q9Y3E1 203 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms