RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 ZNF250P15622 560 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 FAHP16930 419 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 GATA3P23771 443 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 MAPK3P27361 379 aaPredicted RBP12.19□□□□□ -0.46
USP11-207ENST00000478596 ALDH3B1P43353 468 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 ACSM1Q08AH1 577 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 RIPPLY1Q0D2K3 151 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 BAMBIQ13145 260 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 VAX1Q5SQQ9 334 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 DMKNQ6E0U4 476 aaPredicted RBP12.19□□□□□ -0.46
USP11-207ENST00000478596 LRP11Q86VZ4 500 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 ZNF485Q8NCK3 441 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 CCDC54Q8NEL0 328 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 OR13C5Q8NGS8 318 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 GHSRQ92847 366 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 MUL1Q969V5 352 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 SPSB4Q96A44 273 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 TMIGD2Q96BF3 282 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 LYZL4Q96KX0 146 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 ADAT1Q9BUB4 502 aaKnown RBP12.19□□□□□ -0.46
USP11-207ENST00000478596 EXOSC4Q9NPD3 245 aaKnown RBP12.19□□□□□ -0.46
USP11-207ENST00000478596 MYEF2Q9P2K5 600 aaKnown RBP12.19□□□□□ -0.46
USP11-207ENST00000478596 ENPP5Q9UJA9 477 aa12.19□□□□□ -0.46
USP11-207ENST00000478596 NOP16Q9Y3C1 178 aaKnown RBP12.19□□□□□ -0.46
USP11-207ENST00000478596 SIRT4Q9Y6E7 314 aaPredicted RBP12.19□□□□□ -0.46
USP11-207ENST00000478596 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.18□□□□□ -0.46
USP11-207ENST00000478596 ZNF816-ZNF321PA0A0X1KG74 233 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 ANXA2P2A6NMY6 339 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 IQCF6A8MYZ5 107 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 OGG1O15527 345 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 SERPINA3P01011 423 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 KNG1P01042 644 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 CPEP16870 476 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 KITLGP21583 273 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 TNFSF4P23510 183 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 COL8A2P25067 703 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 PSMA1P25786 263 aaKnown RBP12.18□□□□□ -0.46
USP11-207ENST00000478596 DDOSTP39656 456 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 RPS25P62851 125 aaKnown RBP12.18□□□□□ -0.46
USP11-207ENST00000478596 FAM3AP98173 230 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 PSG7Q13046 419 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 OR8G1Q15617 311 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 TRAM1Q15629 374 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 YIF1BQ5BJH7 314 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 DCAF12L2Q5VW00 463 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 PLCXD3Q63HM9 321 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 OR10AC1Q8NH08 325 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 OR8S1Q8NH09 359 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 THRSPQ92748 146 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 RDH5Q92781 318 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 TAF15Q92804 592 aaKnown RBP eCLIP12.18□□□□□ -0.46
USP11-207ENST00000478596 TMEM203Q969S6 136 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 HAVCR1Q96D42 359 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 TPK1Q9H3S4 243 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 C7orf69Q9H7B7 122 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 CYSLTR2Q9NS75 346 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 CKLFQ9UBR5 152 aa12.18□□□□□ -0.46
USP11-207ENST00000478596 CGGBP1Q9UFW8 167 aaPredicted RBP12.18□□□□□ -0.46
USP11-207ENST00000478596 EPPK1P58107 5090 aaKnown RBP12.18□□□□□ -0.46
USP11-207ENST00000478596 A6NIN4 97 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 SPRY3O43610 288 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 GATBO75879 557 aaKnown RBP12.17□□□□□ -0.46
USP11-207ENST00000478596 IGHV3-13P01766 116 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 ISG15P05161 165 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 GABRA5P31644 462 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 ZNF81P51508 661 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 PPP3R1P63098 170 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 MRPS11P82912 194 aaKnown RBP12.17□□□□□ -0.46
USP11-207ENST00000478596 DOC2BQ14184 412 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 OR8B8Q15620 311 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 MSMPQ1L6U9 139 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 REC114Q7Z4M0 266 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 OR8G5Q8NG78 346 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 OR2Z1Q8NG97 314 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 OR10AD1Q8NGE0 317 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 OR51A4Q8NGJ6 313 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 PIGCQ92535 297 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 PGLYRP3Q96LB9 341 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 HIST1H2AAQ96QV6 131 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 OR14A2Q96R54 314 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 ZNF665Q9H7R5 613 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 MSL2Q9HCI7 577 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 ZNF275Q9NSD4 429 aaPredicted RBP12.17□□□□□ -0.46
USP11-207ENST00000478596 NDUFB11Q9NX14 153 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 NKIRAS2Q9NYR9 191 aa12.17□□□□□ -0.46
USP11-207ENST00000478596 IGLV3-9A0A075B6K5 115 aa12.16□□□□□ -0.46
USP11-207ENST00000478596 A0A1B0GTI1 187 aa12.16□□□□□ -0.46
USP11-207ENST00000478596 NOL3O60936 208 aaKnown RBP12.16□□□□□ -0.46
USP11-207ENST00000478596 HPXP02790 462 aa12.16□□□□□ -0.46
USP11-207ENST00000478596 NAT2P11245 290 aa12.16□□□□□ -0.46
USP11-207ENST00000478596 CCL1P22362 96 aa12.16□□□□□ -0.46
USP11-207ENST00000478596 CA6P23280 308 aa12.16□□□□□ -0.46
USP11-207ENST00000478596 ACKR3P25106 362 aa12.16□□□□□ -0.46
USP11-207ENST00000478596 LIPAP38571 399 aa12.16□□□□□ -0.46
USP11-207ENST00000478596 GP2P55259 537 aaKnown RBP12.16□□□□□ -0.46
USP11-207ENST00000478596 PRDX4Q13162 271 aa12.16□□□□□ -0.46
USP11-207ENST00000478596 TPBGQ13641 420 aa12.16□□□□□ -0.46
USP11-207ENST00000478596 SLC9A3R2Q15599 337 aa12.16□□□□□ -0.46
USP11-207ENST00000478596 BEAN1Q3B7T3 259 aa12.16□□□□□ -0.46
USP11-207ENST00000478596 Q499Y3 187 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms