RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 CD28P10747 220 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 ZNF14P17017 642 aaPredicted RBP3.38□□□□□ -1.87
VPS50-214ENST00000477935 ATP6V1C1P21283 382 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 ACKR3P25106 362 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 SPRP35270 261 aaPredicted RBP3.38□□□□□ -1.87
VPS50-214ENST00000477935 MAGEA3P43357 314 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 NCBP2P52298 156 aaKnown RBP eCLIP3.38□□□□□ -1.872e-7■■■■□ 26.1
VPS50-214ENST00000477935 TAS2R39P59534 338 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 MERTKQ12866 999 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 IFT88Q13099 833 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 SNX1Q13596 522 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 CYLC2Q14093 348 aaPredicted RBP3.38□□□□□ -1.87
VPS50-214ENST00000477935 SPA17Q15506 151 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 ALKBH6Q3KRA9 238 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 NHLRC3Q5JS37 347 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 TTC19Q6DKK2 380 aaPredicted RBP3.38□□□□□ -1.87
VPS50-214ENST00000477935 TMEM225Q6GV28 225 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 TMEM107Q6UX40 140 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 PEX26Q7Z412 305 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 CALHM3Q86XJ0 350 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 SYCE1Q8N0S2 351 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 TMCO5AQ8N6Q1 288 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 ZNF283Q8N7M2 679 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 OR9K2Q8NGE7 335 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 DCAKDQ8WVC6 231 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 C1orf54Q8WWF1 131 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 FAM46BQ96A09 425 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 DNAJA3Q96EY1 480 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 CERS2Q96G23 380 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 SAMD8Q96LT4 415 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 KLHDC3Q9BQ90 382 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 PPA2Q9H2U2 334 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 GPR173Q9NS66 373 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 TMEM106BQ9NUM4 274 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 TAS2R7Q9NYW3 318 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 PSORS1C1Q9UIG5 152 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 FZR1Q9UM11 496 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 ETV7Q9Y603 341 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 KMT2AQ03164 3969 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 A0A087X0K7 114 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 SYCE1LA8MT33 242 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 CEACAM18A8MTB9 384 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 ZNF99A8MXY4 864 aaPredicted RBP3.37□□□□□ -1.87
VPS50-214ENST00000477935 PHYHO14832 338 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 ZNF208O43345 1280 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 ENTPD5O75356 428 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 UPK3AO75631 287 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 GLCEO94923 617 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 RAB36O95755 333 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 PTHP01270 115 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 IGHV1-46P01743 117 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 SERPINA5P05154 406 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 CD55P08174 381 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 OR8G3PP0DMU2 310 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 CD79AP11912 226 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 RPS2P15880 293 aaKnown RBP3.37□□□□□ -1.87
VPS50-214ENST00000477935 CFHR2P36980 270 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 SLC1A6P48664 564 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 CCNG1P51959 295 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 UCP2P55851 309 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 TPM4P67936 248 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 OR4D1Q15615 310 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 ARHGAP11BQ3KRB8 267 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 SEL1L2Q5TEA6 688 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 METTL11BQ5VVY1 283 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 GRINAQ7Z429 371 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 SNX32Q86XE0 403 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 VSTM4Q8IW00 320 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 OR8B3Q8NGG8 313 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 ADAMTS16Q8TE57 1224 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 ATP6V1E2Q96A05 226 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 DDIT4LQ96D03 193 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 ZNF75AQ96N20 296 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 OR8B2Q96RD0 313 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 RHOXF2Q9BQY4 288 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 MMADHCQ9H3L0 296 aaPredicted RBP3.37□□□□□ -1.87
VPS50-214ENST00000477935 C1orf198Q9H425 327 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 ELOVL6Q9H5J4 265 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 EDA2RQ9HAV5 297 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 INPP5EQ9NRR6 644 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 GIN1Q9NXP7 522 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 ZNRD1Q9P1U0 126 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 VPS29Q9UBQ0 182 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 CLN8Q9UBY8 286 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 MGAT4AQ9UM21 535 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 SIGLEC9Q9Y336 463 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 RNF11Q9Y3C5 154 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 MAB21L2Q9Y586 359 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 ALMS1Q8TCU4 4167 aa3.37□□□□□ -1.87
VPS50-214ENST00000477935 TEX48A0A1B0GUV7 120 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 GNG14A0A1W2PPG7 69 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 H0YHG0 523 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 UBL3O95164 117 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 WISP3O95389 354 aaPredicted RBP3.36□□□□□ -1.87
VPS50-214ENST00000477935 SNAP29O95721 258 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 PAHP00439 452 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 HLA-HP01893 362 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 LYNP07948 512 aa3.36□□□□□ -1.87
VPS50-214ENST00000477935 IL3P08700 152 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms