RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 KLRC4-KLRK1H3BQV0 150 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 WDR1O75083 606 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 TXNDC12O95881 172 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 GPM6AP51674 278 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 PPIAP62937 165 aaKnown RBP9.74□□□□□ -0.85
COL27A1-204ENST00000477421 ARF1P84077 181 aaKnown RBP9.74□□□□□ -0.85
COL27A1-204ENST00000477421 PABPC1L2AQ5JQF8 200 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 CLLU1Q5K131 121 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 BAP18Q8IXM2 172 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 CARFQ8N187 725 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 FAM181AQ8N9Y4 354 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 DYRK2Q92630 601 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 HDHD3Q9BSH5 251 aaPredicted RBP9.74□□□□□ -0.85
COL27A1-204ENST00000477421 ESRP2Q9H6T0 727 aaKnown RBP9.74□□□□□ -0.85
COL27A1-204ENST00000477421 PUS1Q9Y606 427 aaKnown RBP eCLIP9.74□□□□□ -0.85
COL27A1-204ENST00000477421 A0A0J9YW62 118 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 CD300LBA8K4G0 201 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 VSTM5A8MXK1 200 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 LRP3O75074 770 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 DHRS3O75911 302 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 RAC1P63000 192 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 CFHR1Q03591 330 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 ADAD2Q8NCV1 583 aaKnown RBP9.74□□□□□ -0.85
COL27A1-204ENST00000477421 GPX8Q8TED1 209 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 PP6455Q8WZ26 134 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 PLPPR2Q96GM1 343 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 SHANK1Q9Y566 2161 aa9.74□□□□□ -0.85
COL27A1-204ENST00000477421 CCDC187A0A096LP49 1063 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 TRBV5-5A0A0J9YX44 114 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 LEUTXA8MZ59 168 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 NME2P1O60361 137 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 GCH1P30793 250 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 ZNF133P52736 654 aaPredicted RBP9.73□□□□□ -0.85
COL27A1-204ENST00000477421 RAB1AP62820 205 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 SLC10A1Q14973 349 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 RTL6Q6ICC9 239 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 TMPRSS7Q7RTY8 843 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 OR56B2PQ8NGI1 322 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 EMG1Q92979 244 aaKnown RBP9.73□□□□□ -0.85
COL27A1-204ENST00000477421 UQCC2Q9BRT2 126 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 SUCNR1Q9BXA5 334 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 KCNK7Q9Y2U2 307 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 AQP8O94778 261 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 RAC2P15153 192 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 GABRA2P47869 451 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 SELENOVP59797 346 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 UNQ9370/PRO34162Q6UXP9 181 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 SVBPQ8N300 66 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 ZNF709Q8N972 641 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 FER1L6-AS2Q96M78 137 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 KLK13Q9UKR3 277 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 TCFL5Q9UL49 500 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 ABCA4P78363 2273 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 A0A087WZY1 265 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 TUSC2O75896 110 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 RRASP10301 218 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 CXCL2P19875 107 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 RAB32Q13637 225 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 EDDM3AQ14507 147 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 OR1C1Q15619 314 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 PAN3Q58A45 887 aaKnown RBP9.73□□□□□ -0.85
COL27A1-204ENST00000477421 SHEQ5VZ18 495 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 TMEM268Q5VZI3 342 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 ZNF529Q6P280 563 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 SPICQ8N5J4 248 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 DTWD2Q8NBA8 298 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 OR13C8Q8NGS7 320 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 FBXW5Q969U6 566 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 SPSB2Q99619 263 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 OCSTAMPQ9BR26 566 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 MS4A7Q9GZW8 240 aaPredicted RBP9.73□□□□□ -0.85
COL27A1-204ENST00000477421 SLC17A5Q9NRA2 495 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 ZMAT5Q9UDW3 170 aaKnown RBP9.73□□□□□ -0.85
COL27A1-204ENST00000477421 FER1L5A0AVI2 2057 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 AKR1C3P42330 323 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 MICBQ29980 383 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 LINC00114Q6XXX2 140 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 ZNF574Q6ZN55 896 aaPredicted RBP9.73□□□□□ -0.85
COL27A1-204ENST00000477421 ARHGEF39Q8N4T4 335 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 KCNK17Q96T54 332 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 ZFP64Q9NPA5 681 aa9.73□□□□□ -0.85
COL27A1-204ENST00000477421 ZNF732B4DXR9 585 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 SIRPB1O00241 398 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 TOX3O15405 576 aaPredicted RBP9.72□□□□□ -0.85
COL27A1-204ENST00000477421 MPC2O95563 127 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 CBR1P16152 277 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 RPL12P30050 165 aaKnown RBP9.72□□□□□ -0.85
COL27A1-204ENST00000477421 FABP6P51161 128 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 BPHLQ86WA6 291 aaPredicted RBP9.72□□□□□ -0.85
COL27A1-204ENST00000477421 CXorf67Q86X51 503 aaPredicted RBP9.72□□□□□ -0.85
COL27A1-204ENST00000477421 LGI3Q8N145 548 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 OSR2Q8N2R0 312 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 ARRDC1Q8N5I2 433 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 OR5M9Q8NGP3 310 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 OR6K3Q8NGY3 331 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 TMUB1Q9BVT8 246 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 GLS2Q9UI32 602 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 WASF3Q9UPY6 502 aa9.72□□□□□ -0.85
COL27A1-204ENST00000477421 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.72□□□□□ -0.85
COL27A1-204ENST00000477421 KLK2P20151 261 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms