RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 MUC20Q8N307 709 aaPredicted RBP10.38□□□□□ -0.75
U2AF1-209ENST00000475639 OR5A2Q8NGI9 324 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 PRSS3P2Q8NHM4 247 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 TECTBQ96PL2 329 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 BANF2Q9H503 90 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 OR5V1Q9UGF6 321 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 RALYQ9UKM9 306 aaKnown RBP10.38□□□□□ -0.75
U2AF1-209ENST00000475639 KIF26AQ9ULI4 1882 aaPredicted RBP10.38□□□□□ -0.75
U2AF1-209ENST00000475639 CRYAAP02489 173 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 CALCBP10092 127 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 SELEP16581 610 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 RPL29P47914 159 aaKnown RBP10.37□□□□□ -0.75
U2AF1-209ENST00000475639 GNB1P62873 340 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 ERV3-1Q14264 604 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 CDKN3Q16667 212 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 TMEM268Q5VZI3 342 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 OR10AD1Q8NGE0 317 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 SLC35A4Q96G79 324 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 UBQLN3Q9H347 655 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 AAMDCQ9H7C9 122 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 SLC2A9Q9NRM0 540 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 TREM2Q9NZC2 230 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 CGGBP1Q9UFW8 167 aaPredicted RBP10.37□□□□□ -0.75
U2AF1-209ENST00000475639 GVINP1Q7Z2Y8 2422 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 ANKRD20A5PA0PJZ0 165 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 ZC3H12DA2A288 527 aaKnown RBP10.37□□□□□ -0.75
U2AF1-209ENST00000475639 MASP2O00187 686 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 SH2D1BO14796 132 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 CRXO43186 299 aaPredicted RBP10.37□□□□□ -0.75
U2AF1-209ENST00000475639 HNF1AP20823 631 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 CLN3Q13286 438 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 TMEM97Q5BJF2 176 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 LIPNQ5VXI9 398 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 DCXRQ7Z4W1 244 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 VRK3Q8IV63 474 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 TMEM99Q8N816 258 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 KCNE4Q8WWG9 221 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 RDH5Q92781 318 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 Q96M85 177 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 CXorf36Q9H7Y0 433 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 HES4Q9HCC6 221 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 GDE1Q9NZC3 331 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 CEP250Q9BV73 2442 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 PLPP2O43688 288 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 COX7A2P2O60397 106 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 OR8G1Q15617 311 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 DTWD2Q8NBA8 298 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 DEFB108BQ8NET1 73 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 OR10C1Q96KK4 312 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 ZNF2Q9BSG1 426 aaPredicted RBP10.37□□□□□ -0.75
U2AF1-209ENST00000475639 ULBP3Q9BZM4 244 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 TMEM231Q9H6L2 316 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 FGF21Q9NSA1 209 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 HELTA6NFD8 242 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 F5H697 171 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 HS3ST1O14792 307 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 GNB2P62879 340 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 RELQ04864 619 aaPredicted RBP10.37□□□□□ -0.75
U2AF1-209ENST00000475639 AGBL4Q5VU57 503 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 PLXDC2Q6UX71 529 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 LINC00696Q6ZRV3 163 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 H1FNTQ75WM6 255 aaPredicted RBP10.37□□□□□ -0.75
U2AF1-209ENST00000475639 TMEM37Q8WXS4 190 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 PGLYRP3Q96LB9 341 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 POFUT1Q9H488 388 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 PAPPA2Q9BXP8 1791 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 PLXNA3P51805 1871 aa10.37□□□□□ -0.75
U2AF1-209ENST00000475639 ZDBF2Q9HCK1 2354 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 OR2T8A6NH00 312 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 ZNF716A6NP11 495 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 CNMDO75829 334 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 GOSR1O95249 250 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 C1orf105O95561 183 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 SLC25A6P12236 298 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 GPM6AP51674 278 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 C14orf144Q96I85 54 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 DERL3Q96Q80 235 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 DNAJC25-GNG10A0A024R161 153 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 STARD6P59095 220 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 HIST1H3AP68431 136 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 FAM3AP98173 230 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 YOD1Q5VVQ6 348 aaPredicted RBP10.36□□□□□ -0.75
U2AF1-209ENST00000475639 HSD11B1LQ7Z5J1 315 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 OR51F2Q8NH61 342 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 SLC25A38Q96DW6 304 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 GGACTQ9BVM4 153 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 HINT3Q9NQE9 182 aaKnown RBP10.36□□□□□ -0.75
U2AF1-209ENST00000475639 TRBV5-4A0A0C4DH59 114 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 MYADML2A6NDP7 307 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 H0YIV9 168 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 GUSBP08236 651 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 CD200P41217 278 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 ZNF280AP59817 542 aaPredicted RBP10.36□□□□□ -0.75
U2AF1-209ENST00000475639 INPP5JQ15735 1006 aaPredicted RBP10.36□□□□□ -0.75
U2AF1-209ENST00000475639 TEX30Q5JUR7 227 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 RHOVQ96L33 236 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 A4GALTQ9NPC4 353 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 MBD1Q9UIS9 605 aaPredicted RBP10.36□□□□□ -0.75
U2AF1-209ENST00000475639 ZMIZ1Q9ULJ6 1067 aa10.36□□□□□ -0.75
U2AF1-209ENST00000475639 MMACHCQ9Y4U1 282 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms