RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	TGM4	P49221	684 aa		13.71	□□□□□ -0.21
VPS8-222	ENST00000475580	OR12D2	P58182	307 aa		13.71	□□□□□ -0.21
VPS8-222	ENST00000475580	NANOS3	P60323	173 aa	Known RBP	13.71	□□□□□ -0.21
VPS8-222	ENST00000475580	FGF12	P61328	243 aa		13.71	□□□□□ -0.21
VPS8-222	ENST00000475580	FAM220A	Q7Z4H9	259 aa		13.71	□□□□□ -0.21
VPS8-222	ENST00000475580	BCL6B	Q8N143	479 aa	Predicted RBP	13.71	□□□□□ -0.21
VPS8-222	ENST00000475580	ZNF418	Q8TF45	676 aa	Predicted RBP	13.71	□□□□□ -0.21
VPS8-222	ENST00000475580	ZNF649	Q9BS31	505 aa		13.71	□□□□□ -0.21
VPS8-222	ENST00000475580	AMBN	Q9NP70	447 aa		13.71	□□□□□ -0.21
VPS8-222	ENST00000475580	ESM1	Q9NQ30	184 aa		13.71	□□□□□ -0.21
VPS8-222	ENST00000475580	SNTG1	Q9NSN8	517 aa		13.71	□□□□□ -0.21
VPS8-222	ENST00000475580	SMPD3	Q9NY59	655 aa	Predicted RBP	13.71	□□□□□ -0.21
VPS8-222	ENST00000475580	MYRF	Q9Y2G1	1151 aa		13.71	□□□□□ -0.21
VPS8-222	ENST00000475580		A0A1B0GVI7	797 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	LOC107986453	A0A1B0GWG9	222 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	SYT7	O43581	403 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	PLAT	P00750	562 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	SELL	P14151	372 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	MMP9	P14780	707 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	CD276	Q5ZPR3	534 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	LPCAT4	Q643R3	524 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	FDX2	Q6P4F2	183 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	HAGHL	Q6PII5	290 aa	Predicted RBP	13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	BTN2A1	Q7KYR7	527 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	RDH10	Q8IZV5	341 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	BPIFB2	Q8N4F0	458 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	ACBD7	Q8N6N7	88 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	OR2G2	Q8NGZ5	317 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	ANGPTL6	Q8NI99	470 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	RDH12	Q96NR8	316 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	GAFA1	Q96PS6	74 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	SUCNR1	Q9BXA5	334 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	DNTTIP1	Q9H147	329 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	NLK	Q9UBE8	527 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	DNAJB11	Q9UBS4	358 aa		13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	SOX21	Q9Y651	276 aa	Predicted RBP	13.7	□□□□□ -0.22
VPS8-222	ENST00000475580	IGHV3OR16-10	A0A075B7F0	116 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	TRAV40	A0A0B4J280	105 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	SNTN	A6NMZ2	147 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	ZNF879	B4DU55	563 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	ANKRD65	E5RJM6	399 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	SYNGR1	O43759	233 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	WBP4	O75554	376 aa	Known RBP	13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	IGHA1	P01876	353 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	GLRA1	P23415	457 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	PEX2	P28328	305 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	RCN1	Q15293	331 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	UBE2V2	Q15819	145 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	LRRC36	Q1X8D7	754 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	C11orf91	Q3C1V1	193 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	ZNF788	Q6ZQV5	615 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	SLC36A1	Q7Z2H8	476 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	KCTD20	Q7Z5Y7	419 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	ZDHHC22	Q8N966	263 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	ST8SIA4	Q92187	359 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	PELI1	Q96FA3	418 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	C4orf36	Q96KX1	117 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	ZNF488	Q96MN9	340 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580		Q96MT0	163 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	ZNF48	Q96MX3	618 aa	Predicted RBP	13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	TBX15	Q96SF7	602 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	MRPS18A	Q9NVS2	196 aa	Known RBP	13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	FRRS1L	Q9P0K9	344 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	ZNF222	Q9UK12	451 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	PCDHGB1	Q9Y5G3	927 aa		13.69	□□□□□ -0.22
VPS8-222	ENST00000475580	IGKV1D-17	A0A075B6S4	117 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	ANKRD61	A6NGH8	418 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	OR2AT4	A6NND4	320 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	ECD	O95905	644 aa	Predicted RBP	13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	LIPF	P07098	398 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	SFTPB	P07988	381 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	UBC	P0CG48	685 aa	Known RBP	13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	PSG2	P11465	335 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	FPR2	P25090	351 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	MPZ	P25189	248 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	HAAO	P46952	286 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	IKZF1	Q13422	519 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	GALE	Q14376	348 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	SMN1	Q16637	294 aa	Known RBP	13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	DGUOK	Q16854	277 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	C9orf139	Q6ZV77	190 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	LHFPL3	Q86UP9	236 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	ZNF573	Q86YE8	665 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	SIGLECL1	Q8N7X8	197 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	POC1A	Q8NBT0	407 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	LY6G5B	Q8NDX9	201 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	CCDC54	Q8NEL0	328 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	ZNF671	Q8TAW3	534 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	ZFAND2B	Q8WV99	257 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	CHST5	Q9GZS9	411 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	SIRPD	Q9H106	197 aa		13.68	□□□□□ -0.22
VPS8-222	ENST00000475580	ANK2	Q01484	3957 aa		13.67	□□□□□ -0.22
VPS8-222	ENST00000475580	IGKV1-27	A0A075B6S5	117 aa		13.67	□□□□□ -0.22
VPS8-222	ENST00000475580		J3QLW9	94 aa		13.67	□□□□□ -0.22
VPS8-222	ENST00000475580		J3QT63	122 aa		13.67	□□□□□ -0.22
VPS8-222	ENST00000475580	SIGLEC5	O15389	551 aa		13.67	□□□□□ -0.22
VPS8-222	ENST00000475580	NDUFB3	O43676	98 aa		13.67	□□□□□ -0.22
VPS8-222	ENST00000475580	NOS1AP	O75052	506 aa	Predicted RBP	13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms