RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SLCO1B3Q9NPD5 702 aa3.51□□□□□ -1.85
SMC5-203ENST00000475540 ZDHHC4Q9NPG8 344 aa3.51□□□□□ -1.85
SMC5-203ENST00000475540 ASCL3Q9NQ33 180 aa3.51□□□□□ -1.85
SMC5-203ENST00000475540 USE1Q9NZ43 259 aa3.51□□□□□ -1.85
SMC5-203ENST00000475540 UVRAGQ9P2Y5 699 aa3.51□□□□□ -1.85
SMC5-203ENST00000475540 ZNF257Q9Y2Q1 563 aa3.51□□□□□ -1.85
SMC5-203ENST00000475540 SNX24Q9Y343 169 aa3.51□□□□□ -1.85
SMC5-203ENST00000475540 WIF1Q9Y5W5 379 aa3.51□□□□□ -1.85
SMC5-203ENST00000475540 F11RQ9Y624 299 aaKnown RBP3.51□□□□□ -1.85
SMC5-203ENST00000475540 USH1CQ9Y6N9 552 aa3.51□□□□□ -1.85
SMC5-203ENST00000475540 KIAA0232Q92628 1395 aa3.51□□□□□ -1.85
SMC5-203ENST00000475540 WDR62O43379 1518 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 TRAV8-4A0A0B4J246 113 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 FAM240AA0A1B0GVK7 77 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 LINC01619G3V211 115 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 SNAP29O95721 258 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 P01737 135 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 FABP3P05413 133 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 KRT7P08729 469 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 ZDHHC11BP0C7U3 371 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 RPA3P35244 121 aaPredicted RBP3.5□□□□□ -1.85
SMC5-203ENST00000475540 MAGEA2P43356 314 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 UBE2AP49459 152 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 MTPNP58546 118 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 ITGB3BPQ13352 177 aaPredicted RBP3.5□□□□□ -1.85
SMC5-203ENST00000475540 OR1Q1Q15612 314 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 ZNHIT3Q15649 155 aaPredicted RBP3.5□□□□□ -1.85
SMC5-203ENST00000475540 EXOC3L4Q17RC7 722 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 HBMQ6B0K9 141 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 Q6ZT83 130 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 SLC7A5P1Q8MH63 180 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 METTL13Q8N6R0 699 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 C11orf72Q8NBR9 251 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 ACTRT1Q8TDG2 376 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 PPWD1Q96BP3 646 aaKnown RBP3.5□□□□□ -1.85
SMC5-203ENST00000475540 DCPSQ96C86 337 aaKnown RBP3.5□□□□□ -1.85
SMC5-203ENST00000475540 DNAJC19Q96DA6 116 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 RSG1Q9BU20 258 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 SLC25A2Q9BXI2 301 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 NLE1Q9NVX2 485 aaPredicted RBP3.5□□□□□ -1.85
SMC5-203ENST00000475540 IL20Q9NYY1 176 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 TFR2Q9UP52 801 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 ZNF835Q9Y2P0 537 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 SIGLEC9Q9Y336 463 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 CARMIL3Q8ND23 1372 aa3.5□□□□□ -1.85
SMC5-203ENST00000475540 NFASCO94856 1347 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 ELP1O95163 1332 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 PCDH11XQ9BZA7 1347 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 A0A1B0GX12 115 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 TNFRSF11BO00300 401 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 BET1O15155 118 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 RAD1O60671 282 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 CTDNEP1O95476 244 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 CD3GP09693 182 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 HSPD1P10809 573 aaKnown RBP3.49□□□□□ -1.85
SMC5-203ENST00000475540 ZNF30P17039 623 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 ZNF138P52744 262 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 UBE2NP61088 152 aaKnown RBP3.49□□□□□ -1.85
SMC5-203ENST00000475540 MAGOHP61326 146 aaKnown RBP3.49□□□□□ -1.85
SMC5-203ENST00000475540 SLC7A9P82251 487 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 CD164Q04900 197 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 RAB31Q13636 194 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 TRAM1Q15629 374 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 RGS21Q2M5E4 152 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 SYT6Q5T7P8 510 aaPredicted RBP3.49□□□□□ -1.85
SMC5-203ENST00000475540 DCXRQ7Z4W1 244 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 COX18Q8N8Q8 333 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 ACBD4Q8NC06 268 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 OR51Q1Q8NH59 317 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 RNASEH2CQ8TDP1 164 aaKnown RBP3.49□□□□□ -1.85
SMC5-203ENST00000475540 C17orf50Q8WW18 174 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 OR5P2Q8WZ92 322 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 LRRC58Q96CX6 371 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 HBEGFQ99075 208 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 C20orf144Q9BQM9 153 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 POTEKPQ9BYX7 375 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 EDA2RQ9HAV5 297 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 RRAGDQ9NQL2 400 aaPredicted RBP3.49□□□□□ -1.85
SMC5-203ENST00000475540 OR12D3Q9UGF7 316 aa3.49□□□□□ -1.85
SMC5-203ENST00000475540 IGKV1D-17A0A075B6S4 117 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 A0A0J9YXV3 536 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 A0A1W2PRG6 482 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 ISPDA4D126 451 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 CDIPTO14735 213 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 MYL12BO14950 172 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 SEMA3DO95025 777 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 IGLV2-23P01705 113 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 CD5P06127 495 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 ZNF286BP0CG31 522 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 GGT2P36268 569 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 TUFMP49411 452 aaKnown RBP3.48□□□□□ -1.85
SMC5-203ENST00000475540 CYB561P49447 251 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 CACNG7P62955 275 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 TRIP13Q15645 432 aaPredicted RBP3.48□□□□□ -1.85
SMC5-203ENST00000475540 TOMM34Q15785 309 aaPredicted RBP3.48□□□□□ -1.85
SMC5-203ENST00000475540 SDHAF4Q5VUM1 108 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 METTL21CQ5VZV1 264 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 ARL9Q6T311 187 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 STPG2Q8N412 459 aa3.48□□□□□ -1.85
SMC5-203ENST00000475540 NT5CQ8TCD5 201 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms