RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 SLC35D2Q76EJ3 337 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 OR2W3Q7Z3T1 314 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 SLC7A5P1Q8MH63 180 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 TRAM1L1Q8N609 369 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 PIH1D2Q8WWB5 315 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 CERS2Q96G23 380 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 UBE2E2Q96LR5 201 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 NAPGQ99747 312 aaPredicted RBP1.7□□□□□ -2.14
LTN1-204ENST00000475344 TBL1XR1Q9BZK7 514 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 API5Q9BZZ5 524 aaKnown RBP1.7□□□□□ -2.14
LTN1-204ENST00000475344 OR51B5Q9H339 312 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 RGCCQ9H4X1 137 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 ARMC7Q9H6L4 198 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 PRSS16Q9NQE7 514 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 FBXO8Q9NRD0 319 aa1.7□□□□□ -2.14
LTN1-204ENST00000475344 RABL2AQ9UBK7 228 aaPredicted RBP1.7□□□□□ -2.14
LTN1-204ENST00000475344 NDRG2Q9UN36 371 aaKnown RBP1.7□□□□□ -2.14
LTN1-204ENST00000475344 BAZ2AQ9UIF9 1905 aaKnown RBP1.7□□□□□ -2.14
LTN1-204ENST00000475344 TTC41PQ6P2S7 1318 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 IGHV6-1A0A0B4J1U7 121 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 GOLGA6L7A0A1B0GV03 622 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 TMEM72A0PK05 275 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 SCELO95171 688 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 IGHV1-46P01743 117 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 PRKACAP17612 351 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 PMCHP20382 165 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 HLA-DMAP28067 261 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 GABRR2P28476 465 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 PEX19P40855 299 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 CSKP41240 450 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 TGM4P49221 684 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 MTPNP58546 118 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 ATP6V0D1P61421 351 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 SLC35A1P78382 337 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 LCN2P80188 198 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 ST3GAL4Q11206 333 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 BIKQ13323 160 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 FAM53BQ14153 422 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 HHATQ5VTY9 493 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 MLIPQ5VWP3 458 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 KDM4DQ6B0I6 523 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 TTC19Q6DKK2 380 aaPredicted RBP1.69□□□□□ -2.14
LTN1-204ENST00000475344 APOBEC3HQ6NTF7 200 aaKnown RBP1.69□□□□□ -2.14
LTN1-204ENST00000475344 ADM2Q7Z4H4 148 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 FAM184AQ8NB25 1140 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 OR5T3Q8NGG3 340 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 OR6K6Q8NGW6 343 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 ZFAND1Q8TCF1 268 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 RXFP2Q8WXD0 754 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 YIPF5Q969M3 257 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 ZBED3Q96IU2 234 aaPredicted RBP1.69□□□□□ -2.14
LTN1-204ENST00000475344 NAA50Q9GZZ1 169 aaKnown RBP1.69□□□□□ -2.14
LTN1-204ENST00000475344 STMN4Q9H169 189 aaPredicted RBP1.69□□□□□ -2.14
LTN1-204ENST00000475344 ARV1Q9H2C2 271 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 LINC00574Q9H8X3 128 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 RHBDD3Q9Y3P4 386 aa1.69□□□□□ -2.14
LTN1-204ENST00000475344 ZNF608Q9ULD9 1512 aaPredicted RBP1.69□□□□□ -2.14
LTN1-204ENST00000475344 DYSFO75923 2080 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 TRAV8-4A0A0B4J246 113 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 IGHV2OR16-5A0A0B4J2B6 119 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.68□□□□□ -2.14
LTN1-204ENST00000475344 DFFAO00273 331 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 KLHL2O95198 593 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 SNAI1O95863 264 aaPredicted RBP1.68□□□□□ -2.14
LTN1-204ENST00000475344 GCGP01275 180 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 P01737 135 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 TUBG1P23258 451 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 PSMD4P55036 377 aaKnown RBP1.68□□□□□ -2.14
LTN1-204ENST00000475344 PSMC5P62195 406 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 DOC2AQ14183 400 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 IHHQ14623 411 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 FBXL19-AS1Q494R0 122 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 HIKESHIQ53FT3 197 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 TBPL2Q6SJ96 375 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 LINC00523Q86TU6 105 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 BBS7Q8IWZ6 715 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 TMEM234Q8WY98 164 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 TMEM159Q96B96 161 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 KLF6Q99612 283 aaPredicted RBP1.68□□□□□ -2.14
LTN1-204ENST00000475344 SEC22CQ9BRL7 303 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 TDRD3Q9H7E2 651 aaKnown RBP1.68□□□□□ -2.14
LTN1-204ENST00000475344 TUBG2Q9NRH3 451 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 DDX18Q9NVP1 670 aaKnown RBP1.68□□□□□ -2.14
LTN1-204ENST00000475344 TAS2R1Q9NYW7 299 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 STX18Q9P2W9 335 aaKnown RBP1.68□□□□□ -2.14
LTN1-204ENST00000475344 VAX2Q9UIW0 290 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 RWDD2AQ9UIY3 292 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 RAB22AQ9UL26 194 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 CFL2Q9Y281 166 aa1.68□□□□□ -2.14
LTN1-204ENST00000475344 TRAV8-6A0A0B4J262 113 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 A0A0G2JMP0 313 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 A0A0X1KG70 313 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 J3QKU1 62 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 GATCO43716 136 aaKnown RBP1.67□□□□□ -2.14
LTN1-204ENST00000475344 CNMDO75829 334 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 FSTL3O95633 263 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 PFN1P07737 140 aaKnown RBP1.67□□□□□ -2.14
LTN1-204ENST00000475344 SNRPAP09012 282 aaKnown RBP1.67□□□□□ -2.14
LTN1-204ENST00000475344 CD28P10747 220 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 IVDP26440 423 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms