RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 SLC6A9P48067 706 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 AQP5P55064 265 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 ST3GAL2Q16842 350 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF672Q499Z4 452 aaPredicted RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 ASCL5Q7RTU5 278 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 TMED4Q7Z7H5 227 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 OAFQ86UD1 273 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 UMODL1-AS1Q8N2C9 162 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 PAQR4Q8N4S7 273 aaPredicted RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 CHST4Q8NCG5 386 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 RPLP0P6Q8NHW5 317 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 DDB2Q92466 427 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 OR2A7Q96R45 310 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 EFCAB11Q9BUY7 163 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 OXSMQ9NWU1 459 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 CLN8Q9UBY8 286 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF230Q9UIE0 474 aaPredicted RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 TDRD15B5MCY1 1934 aaKnown RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 CLDN5O00501 218 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 DNPH1O43598 174 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 MPC1LP0DKB6 136 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 FABP4P15090 132 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 FUT3P21217 361 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF83P51522 516 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 FUT6P51993 359 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 SUMO1P63165 101 aaKnown RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 CR1LQ2VPA4 569 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 GLYATQ6IB77 296 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 FAM71F2Q6NXP2 309 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 KCNIP4Q6PIL6 250 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 PLXDC2Q6UX71 529 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 SIAH3Q8IW03 269 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 OR4E2Q8NGC2 313 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 AKTIPQ9H8T0 292 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 IL36AQ9UHA7 158 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 PSORS1C1Q9UIG5 152 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 URB1O60287 2271 aaKnown RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 WDR27A2RRH5 827 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 CDC14CA4D256 554 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 TRAPPC13A5PLN9 417 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 CD2P06729 351 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 CEBPBP17676 345 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 PSMB4P28070 264 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 TNFRSF4P43489 277 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 SOX2P48431 317 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 SRSF4Q08170 494 aaKnown RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 GNMTQ14749 295 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 CSRP2Q16527 193 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 EIPR1Q53HC9 387 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 RPL22L1Q6P5R6 122 aaKnown RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF549Q6P9A3 640 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF474Q6S9Z5 364 aaPredicted RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 FOXI2Q6ZQN5 318 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 PTGR2Q8N8N7 351 aaPredicted RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 OR4K17Q8NGC6 315 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 LMX1AQ8TE12 382 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF419Q96HQ0 510 aaPredicted RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 CLEC4MQ9H2X3 399 aaPredicted RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 NKX2-4Q9H2Z4 354 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 PIGMQ9H3S5 423 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 NOX4Q9NPH5 578 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 FBXL17Q9UF56 701 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 RARRES3Q9UL19 164 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 EXO1Q9UQ84 846 aaKnown RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 LAMP3Q9UQV4 416 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 TPRKBQ9Y3C4 175 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 MIA3Q5JRA6 1907 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 B4DGG1 531 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 M0QZQ0 153 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 NMBRP28336 390 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 RAB28P51157 221 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 RAB10P61026 200 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 RPS21P63220 83 aaKnown RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 DHRS2Q13268 280 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 CT83Q5H943 113 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 WDR53Q7Z5U6 358 aaPredicted RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 C20orf196Q8IYI0 205 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 MRAPQ8TCY5 172 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 UBTD2Q8WUN7 234 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 OR5P2Q8WZ92 322 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 PCED1BQ96HM7 432 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 FAM46AQ96IP4 442 aaKnown RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 SIGLEC12Q96PQ1 595 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 EPYCQ99645 322 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 DUSP23Q9BVJ7 150 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 CDCA4Q9BXL8 241 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 AKIRIN1Q9H9L7 192 aaPredicted RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 NUDT4Q9NZJ9 180 aa4.26□□□□□ -1.73
NPHP3-206ENST00000474871 CHD3Q12873 2000 aaKnown RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 RP1L1Q8IWN7 2480 aaPredicted RBP4.26□□□□□ -1.73
NPHP3-206ENST00000474871 PDE4DIPQ5VU43 2346 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 TMEM189A5PLL7 270 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 F5H768 121 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 TAX1BP3O14907 124 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 EEDO75530 441 aaKnown RBP4.25□□□□□ -1.73
NPHP3-206ENST00000474871 SYNGR4O95473 234 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 CXCL1P09341 107 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 OR4Q2P0C623 313 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 C8orf88P0DMB2 117 aa4.25□□□□□ -1.73
NPHP3-206ENST00000474871 NBL1P41271 181 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms