RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-208	ENST00000474319	FCGR2C	P31995	323 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	PTGFR	P43088	359 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	SMCO1	Q147U7	214 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	KISS1	Q15726	138 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	C1orf100	Q5SVJ3	147 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	OR5AS1	Q8N127	324 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	FAM71E2	Q8N5Q1	922 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	DDIT4L	Q96D03	193 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	ZNF837	Q96EG3	531 aa	Predicted RBP	9.44	□□□□□ -0.9
LSS-208	ENST00000474319	UCN2	Q96RP3	112 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	NAA11	Q9BSU3	229 aa	Predicted RBP	9.44	□□□□□ -0.9
LSS-208	ENST00000474319	SDHAF3	Q9NRP4	125 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	PIGL	Q9Y2B2	252 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	URGCP-MRPS24	S4R325	110 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	SNAPIN	O95295	136 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	AVPI1	Q5T686	147 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	LPCAT3	Q6P1A2	487 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	FDX2	Q6P4F2	183 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	P4HA3	Q7Z4N8	544 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	MYPOP	Q86VE0	399 aa	Predicted RBP	9.44	□□□□□ -0.9
LSS-208	ENST00000474319	HOGA1	Q86XE5	327 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	MISP	Q8IVT2	679 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	ERGIC1	Q969X5	290 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	NRIP2	Q9BQI9	281 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	RTBDN	Q9BSG5	229 aa	Predicted RBP	9.44	□□□□□ -0.9
LSS-208	ENST00000474319	PLEK2	Q9NYT0	353 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	C14orf166	Q9Y224	244 aa	Known RBP	9.44	□□□□□ -0.9
LSS-208	ENST00000474319	OTOGL	Q3ZCN5	2332 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	FER1L5	A0AVI2	2057 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319		A6NIZ1	184 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	SCRG1	O75711	98 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	HPN	P05981	417 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	FASLG	P48023	281 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	P2RY4	P51582	365 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	BPIFB3	P59826	476 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	RAP1B	P61224	184 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	RAP1A	P62834	184 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	9.44	□□□□□ -0.9
LSS-208	ENST00000474319	RAET1L	Q5VY80	246 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	IFI44	Q8TCB0	444 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	SLC25A43	Q8WUT9	341 aa	Predicted RBP	9.44	□□□□□ -0.9
LSS-208	ENST00000474319	MAGT1	Q9H0U3	335 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	SH3BGRL3	Q9H299	93 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	OCIAD1	Q9NX40	245 aa		9.44	□□□□□ -0.9
LSS-208	ENST00000474319	PUS1	Q9Y606	427 aa	Known RBP eCLIP	9.44	□□□□□ -0.9
LSS-208	ENST00000474319	IGHV3-64D	A0A0J9YX35	117 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319		A0A1W2PPE3	182 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319		A0A1W2PPH5	198 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319		M0R296	226 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	SRSF10	O75494	262 aa	Known RBP	9.43	□□□□□ -0.9
LSS-208	ENST00000474319	SFT2D2	O95562	160 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	BPNT1	O95861	308 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	IGHG1	P01857	330 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	ZNF14	P17017	642 aa	Predicted RBP	9.43	□□□□□ -0.9
LSS-208	ENST00000474319	RPL12	P30050	165 aa	Known RBP	9.43	□□□□□ -0.9
LSS-208	ENST00000474319	PJVK	Q0ZLH3	352 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	ZNF345	Q14585	488 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	PDZD11	Q5EBL8	140 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	DHRS11	Q6UWP2	260 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	OR11L1	Q8NGX0	322 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	MR1	Q95460	341 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	RAB33B	Q9H082	229 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	SPACA1	Q9HBV2	294 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	LPAR3	Q9UBY5	353 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	MCTS1	Q9ULC4	181 aa	Known RBP	9.43	□□□□□ -0.9
LSS-208	ENST00000474319	DMXL1	Q9Y485	3027 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	IGKV3D-11	A0A0A0MRZ8	115 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319		A0A1B0GX78	115 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	LIPT2	A6NK58	231 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	TSPAN15	O95858	294 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	IGLV3-19	P01714	112 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	FST	P19883	344 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	EPHA8	P29322	1005 aa	Predicted RBP	9.43	□□□□□ -0.9
LSS-208	ENST00000474319	PTGER4	P35408	488 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	CBX5	P45973	191 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	MMP16	P51512	607 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	TMEM33	P57088	247 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	PMS2CL	Q68D20	193 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	PEG10	Q86TG7	708 aa	Known RBP	9.43	□□□□□ -0.9
LSS-208	ENST00000474319	SULF2	Q8IWU5	870 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	FAM24B	Q8N5W8	94 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	ZDHHC22	Q8N966	263 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	KCNG3	Q8TAE7	436 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	THRSP	Q92748	146 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	URM1	Q9BTM9	101 aa	Known RBP	9.43	□□□□□ -0.9
LSS-208	ENST00000474319	ZFP57	Q9NU63	452 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	CACNA1D	Q01668	2161 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	DNAJC13	O75165	2243 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	PCNX2	A6NKB5	2137 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	TRAV20	A0A0B4J274	112 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319		A0A1W2PQM1	296 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	NQO2	P16083	231 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	SCAND1	P57086	179 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	C17orf67	Q0P5P2	114 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	MST1L	Q2TV78	715 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	ABCA11P	Q4W5N1	156 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	MIDN	Q504T8	468 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	EIF4E3	Q8N5X7	224 aa	Known RBP	9.43	□□□□□ -0.9
LSS-208	ENST00000474319	FNDC9	Q8TBE3	224 aa		9.43	□□□□□ -0.9
LSS-208	ENST00000474319	CLDN23	Q96B33	292 aa		9.43	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms