RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 WDFY2Q96P53 400 aa18.65■□□□□ 0.58
PTP4A1-203ENST00000473334 TBX15Q96SF7 602 aa18.65■□□□□ 0.58
PTP4A1-203ENST00000473334 NLKQ9UBE8 527 aa18.65■□□□□ 0.58
PTP4A1-203ENST00000473334 E9PQ18 207 aa18.64■□□□□ 0.57
PTP4A1-203ENST00000473334 DLGAP1O14490 977 aa18.64■□□□□ 0.57
PTP4A1-203ENST00000473334 GPR37O15354 613 aa18.64■□□□□ 0.57
PTP4A1-203ENST00000473334 PRTN3P24158 256 aa18.64■□□□□ 0.57
PTP4A1-203ENST00000473334 COMPP49747 757 aaPredicted RBP18.64■□□□□ 0.57
PTP4A1-203ENST00000473334 BPIFB3P59826 476 aa18.64■□□□□ 0.57
PTP4A1-203ENST00000473334 IKZF1Q13422 519 aa18.64■□□□□ 0.57
PTP4A1-203ENST00000473334 LRRC10Q5BKY1 277 aa18.64■□□□□ 0.57
PTP4A1-203ENST00000473334 BRD3OSQ6XYD6 125 aa18.64■□□□□ 0.57
PTP4A1-203ENST00000473334 CATSPERDQ86XM0 798 aa18.64■□□□□ 0.57
PTP4A1-203ENST00000473334 AQP3Q92482 292 aa18.64■□□□□ 0.57
PTP4A1-203ENST00000473334 C9orf16Q9BUW7 83 aa18.64■□□□□ 0.57
PTP4A1-203ENST00000473334 SIRPDQ9H106 197 aa18.64■□□□□ 0.57
PTP4A1-203ENST00000473334 S100A14Q9HCY8 104 aa18.64■□□□□ 0.57
PTP4A1-203ENST00000473334 HAX1O00165 279 aa18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 ENTPD6O75354 484 aa18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 CCL1P22362 96 aa18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 SNRPGP62308 76 aaKnown RBP18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 SLC25A30Q5SVS4 291 aa18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 MEDAGQ5VYS4 303 aa18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 HAGHLQ6PII5 290 aaPredicted RBP18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 ZNF788Q6ZQV5 615 aa18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 ANGPTL6Q8NI99 470 aa18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 RORBQ92753 470 aa18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 MED30Q96HR3 178 aa18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 C1orf147Q96MC9 270 aaPredicted RBP18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 GAFA1Q96PS6 74 aa18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 DUX5Q96PT3 197 aa18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 CNTD2Q9H8S5 307 aa18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 GPR173Q9NS66 373 aa18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 SOX21Q9Y651 276 aaPredicted RBP18.63■□□□□ 0.57
PTP4A1-203ENST00000473334 A0A1B0GVI7 797 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 OR2AT4A6NND4 320 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 SELLP14151 372 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 ARF6P62330 175 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 IL13RA1P78552 427 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 ZNF85Q03923 595 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 PDCD1Q15116 288 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 OCLNQ16625 522 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 ODF4Q2M2E3 257 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 FAM220AQ7Z4H9 259 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 ZNF573Q86YE8 665 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 LY6G5BQ8NDX9 201 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 TMIGD2Q96BF3 282 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 DMRTB1Q96MA1 342 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 MBOAT4Q96T53 435 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 KPTNQ9Y664 436 aa18.62■□□□□ 0.57
PTP4A1-203ENST00000473334 SIGLEC5O15389 551 aa18.61■□□□□ 0.57
PTP4A1-203ENST00000473334 ISL1P61371 349 aa18.61■□□□□ 0.57
PTP4A1-203ENST00000473334 ACTC1P68032 377 aa18.61■□□□□ 0.57
PTP4A1-203ENST00000473334 ACTA1P68133 377 aa18.61■□□□□ 0.57
PTP4A1-203ENST00000473334 RNFT2Q96EX2 444 aa18.61■□□□□ 0.57
PTP4A1-203ENST00000473334 DCTN5Q9BTE1 182 aa18.61■□□□□ 0.57
PTP4A1-203ENST00000473334 PLEKHA1Q9HB21 404 aa18.61■□□□□ 0.57
PTP4A1-203ENST00000473334 GNG8Q9UK08 70 aa18.61■□□□□ 0.57
PTP4A1-203ENST00000473334 GMPPBQ9Y5P6 360 aa18.61■□□□□ 0.57
PTP4A1-203ENST00000473334 TENM1Q9UKZ4 2725 aa18.61■□□□□ 0.57
PTP4A1-203ENST00000473334 CENPVL3A0A0U1RRI6 287 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 MDFIC2A0A1B0GVS7 189 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 PQLC2LA1A4F0 135 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 A6NIN4 97 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 CLDN34H7C241 214 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 J3QT63 122 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 SYT7O43581 403 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 TFF1P04155 84 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 ACAA1P09110 424 aaPredicted RBP18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 PSG2P11465 335 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 HAAOP46952 286 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 GABRA2P47869 451 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 DEFB112Q30KQ8 113 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 CDONQ4KMG0 1287 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 TP53I3Q53FA7 332 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 RUSC1-AS1Q66K80 236 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 PQLC1Q8N2U9 271 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 POC1AQ8NBT0 407 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 CCDC54Q8NEL0 328 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 GATAD2BQ8WXI9 593 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 H1FXQ92522 213 aaKnown RBP18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 LHX4Q969G2 390 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 SLC25A28Q96A46 364 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 ACOXLQ9NUZ1 547 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 RASL12Q9NYN1 266 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 ONECUT1Q9UBC0 465 aa18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 SLC25A10Q9UBX3 287 aaPredicted RBP18.6■□□□□ 0.57
PTP4A1-203ENST00000473334 IGKV1D-17A0A075B6S4 117 aa18.59■□□□□ 0.57
PTP4A1-203ENST00000473334 ANKRD61A6NGH8 418 aa18.59■□□□□ 0.57
PTP4A1-203ENST00000473334 SNTNA6NMZ2 147 aa18.59■□□□□ 0.57
PTP4A1-203ENST00000473334 RNASE1P07998 156 aaKnown RBP18.59■□□□□ 0.57
PTP4A1-203ENST00000473334 CAV3P56539 151 aa18.59■□□□□ 0.57
PTP4A1-203ENST00000473334 SLC9A3R2Q15599 337 aa18.59■□□□□ 0.57
PTP4A1-203ENST00000473334 DGUOKQ16854 277 aa18.59■□□□□ 0.57
PTP4A1-203ENST00000473334 ACP7Q6ZNF0 438 aa18.59■□□□□ 0.57
PTP4A1-203ENST00000473334 ZBTB49Q6ZSB9 765 aa18.59■□□□□ 0.57
PTP4A1-203ENST00000473334 PRSS35Q8N3Z0 413 aa18.59■□□□□ 0.57
PTP4A1-203ENST00000473334 KIR3DL3Q8N743 410 aa18.59■□□□□ 0.57
PTP4A1-203ENST00000473334 C8orf46Q8TAG6 207 aa18.59■□□□□ 0.57
PTP4A1-203ENST00000473334 ADI1Q9BV57 179 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms