RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 CARFQ8N187 725 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 DMBX1Q8NFW5 382 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 SPSB2Q99619 263 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 SMIM3Q9BZL3 60 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 C1orf123Q9NWV4 160 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 PQLC2LA1A4F0 135 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 CD5P06127 495 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 PRF1P14222 555 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 ECH1Q13011 328 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 SLC25A53Q5H9E4 307 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 FAM76BQ5HYJ3 339 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 CPEB2Q7Z5Q1 589 aaKnown RBP18.5■□□□□ 0.55
COL18A1-207ENST00000473212 USB1Q9BQ65 265 aaKnown RBP18.5■□□□□ 0.55
COL18A1-207ENST00000473212 SULT4A1Q9BR01 284 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 HDHD3Q9BSH5 251 aaPredicted RBP18.5■□□□□ 0.55
COL18A1-207ENST00000473212 CRB3Q9BUF7 120 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.5■□□□□ 0.55
COL18A1-207ENST00000473212 FBXL17Q9UF56 701 aa18.5■□□□□ 0.55
COL18A1-207ENST00000473212 ZNF726A6NNF4 738 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 COLCA2A8K830 154 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 K7EPK0 472 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 CST4P01036 141 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 ADH6P28332 368 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 UBE2V2Q15819 145 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 TMEM268Q5VZI3 342 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 DHRS11Q6UWP2 260 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 FAM71E2Q8N5Q1 922 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 PIGTQ969N2 578 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 RASL10BQ96S79 203 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 FCGR2AP12318 317 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 FCGR2CP31995 323 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 GRB2P62993 217 aaKnown RBP18.49■□□□□ 0.55
COL18A1-207ENST00000473212 Q6ZRG5 221 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 C6orf201Q7Z4U5 140 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 ADPRHL1Q8NDY3 354 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 SEMA6DQ8NFY4 1073 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 OXGR1Q96P68 337 aa18.49■□□□□ 0.55
COL18A1-207ENST00000473212 ZNF2Q9BSG1 426 aaPredicted RBP18.49■□□□□ 0.55
COL18A1-207ENST00000473212 PARP12Q9H0J9 701 aaKnown RBP18.49■□□□□ 0.55
COL18A1-207ENST00000473212 MCTS1Q9ULC4 181 aaKnown RBP18.49■□□□□ 0.55
COL18A1-207ENST00000473212 OR8U9P0C7N5 309 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 NAT2P11245 290 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 MSX1P28360 303 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 AFF3P51826 1226 aaKnown RBP18.48■□□□□ 0.55
COL18A1-207ENST00000473212 OR8U1Q8NH10 309 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 SHDQ96IW2 340 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 AKR1E2Q96JD6 320 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 ZNF385AQ96PM9 386 aaKnown RBP18.48■□□□□ 0.55
COL18A1-207ENST00000473212 DHRS7CA6NNS2 312 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 AKR1C3P42330 323 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 MEOX2P50222 304 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 F2RL1P55085 397 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 B2MP61769 119 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 SURF2Q15527 256 aaPredicted RBP18.48■□□□□ 0.55
COL18A1-207ENST00000473212 HIST3H3Q16695 136 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 SKA3Q8IX90 412 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 FNDC9Q8TBE3 224 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 SFT2D1Q8WV19 159 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 ZNF837Q96EG3 531 aaPredicted RBP18.48■□□□□ 0.55
COL18A1-207ENST00000473212 KIRREL1Q96J84 757 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 UCN2Q96RP3 112 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 S100A13Q99584 98 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 ZNF160Q9HCG1 818 aa18.48■□□□□ 0.55
COL18A1-207ENST00000473212 LSM5Q9Y4Y9 91 aaKnown RBP18.48■□□□□ 0.55
COL18A1-207ENST00000473212 SERPINE3A8MV23 424 aa18.47■□□□□ 0.55
COL18A1-207ENST00000473212 GABRR1P24046 479 aa18.47■□□□□ 0.55
COL18A1-207ENST00000473212 KCNMB1Q16558 191 aa18.47■□□□□ 0.55
COL18A1-207ENST00000473212 RABEPKQ7Z6M1 372 aa18.47■□□□□ 0.55
COL18A1-207ENST00000473212 KMT5CQ86Y97 462 aa18.47■□□□□ 0.55
COL18A1-207ENST00000473212 SULF2Q8IWU5 870 aa18.47■□□□□ 0.55
COL18A1-207ENST00000473212 IFT22Q9H7X7 185 aa18.47■□□□□ 0.55
COL18A1-207ENST00000473212 PARP11Q9NR21 331 aa18.47■□□□□ 0.55
COL18A1-207ENST00000473212 GHRLQ9UBU3 117 aa18.47■□□□□ 0.55
COL18A1-207ENST00000473212 TNRC18O15417 2968 aaPredicted RBP18.47■□□□□ 0.55
COL18A1-207ENST00000473212 FAM157AC9JC47 383 aa18.47■□□□□ 0.55
COL18A1-207ENST00000473212 TMEM33P57088 247 aa18.47■□□□□ 0.55
COL18A1-207ENST00000473212 CCL7P80098 99 aa18.47■□□□□ 0.55
COL18A1-207ENST00000473212 RSPO1Q2MKA7 263 aaPredicted RBP18.47■□□□□ 0.55
COL18A1-207ENST00000473212 NSUN5P2Q63ZY6 315 aa18.47■□□□□ 0.55
COL18A1-207ENST00000473212 CLEC9AQ6UXN8 241 aa18.47■□□□□ 0.55
COL18A1-207ENST00000473212 MSTNO14793 375 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 DEDDO75618 318 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 ZFAND5O76080 213 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 SCGB1D2O95969 90 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 ALDH3B1P43353 468 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 ZNF84P51523 738 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 COL19A1Q14993 1142 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 CDCP2Q5VXM1 449 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 SGPP2Q8IWX5 399 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 SECTM1Q8WVN6 248 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 MRPL24Q96A35 216 aaKnown RBP18.46■□□□□ 0.55
COL18A1-207ENST00000473212 GNRHR2Q96P88 292 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 CHRDQ9H2X0 955 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 DVL1P1P54792 670 aaPredicted RBP18.46■□□□□ 0.55
COL18A1-207ENST00000473212 SMCO1Q147U7 214 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 GGNBP1Q5YKI7 109 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 ZNF385CQ66K41 422 aaPredicted RBP18.46■□□□□ 0.55
COL18A1-207ENST00000473212 NAXEQ8NCW5 288 aa18.46■□□□□ 0.55
COL18A1-207ENST00000473212 SPACA9Q96E40 222 aaPredicted RBP18.46■□□□□ 0.55
COL18A1-207ENST00000473212 PRRX2Q99811 253 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms