RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 P01737 135 aa1.95□□□□□ -2.1
PTCD3-209ENST00000472044 CPN2P22792 545 aa1.95□□□□□ -2.1
PTCD3-209ENST00000472044 GNRHRP30968 328 aa1.95□□□□□ -2.1
PTCD3-209ENST00000472044 MPIP34949 423 aa1.95□□□□□ -2.1
PTCD3-209ENST00000472044 HCCSP53701 268 aa1.95□□□□□ -2.1
PTCD3-209ENST00000472044 SLC35B1P78383 322 aa1.95□□□□□ -2.1
PTCD3-209ENST00000472044 TRDNQ13061 729 aa1.95□□□□□ -2.1
PTCD3-209ENST00000472044 ZCCHC24Q8N2G6 241 aaKnown RBP1.95□□□□□ -2.1
PTCD3-209ENST00000472044 OR2M7Q8NG81 312 aa1.95□□□□□ -2.1
PTCD3-209ENST00000472044 OR51L1Q8NGJ5 315 aa1.95□□□□□ -2.1
PTCD3-209ENST00000472044 KIAA1143Q96AT1 154 aaPredicted RBP1.95□□□□□ -2.1
PTCD3-209ENST00000472044 TMEM159Q96B96 161 aa1.95□□□□□ -2.1
PTCD3-209ENST00000472044 TSNAXQ99598 290 aaKnown RBP1.95□□□□□ -2.1
PTCD3-209ENST00000472044 PDCD1LG2Q9BQ51 273 aa1.95□□□□□ -2.1
PTCD3-209ENST00000472044 STMN4Q9H169 189 aaPredicted RBP1.95□□□□□ -2.1
PTCD3-209ENST00000472044 IFNKQ9P0W0 207 aa1.95□□□□□ -2.1
PTCD3-209ENST00000472044 DHCR7Q9UBM7 475 aaKnown RBP1.95□□□□□ -2.1
PTCD3-209ENST00000472044 TFR2Q9UP52 801 aa1.95□□□□□ -2.1
PTCD3-209ENST00000472044 CFL2Q9Y281 166 aa1.95□□□□□ -2.1
PTCD3-209ENST00000472044 TRAV8-6A0A0B4J262 113 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 IGKV1-6A0A0C4DH72 117 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 LOC100653049A0A140TA62 436 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 TMEM72A0PK05 275 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 J3QT63 122 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 GATCO43716 136 aaKnown RBP1.94□□□□□ -2.1
PTCD3-209ENST00000472044 KDELR3O43731 214 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 GMDSO60547 372 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 KRT34O76011 436 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 PTTG1O95997 202 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 IGKV1-39P01597 117 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 MBP02144 154 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 IGKV1D-39P04432 117 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 CD28P10747 220 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 HOXB8P17481 243 aaPredicted RBP1.94□□□□□ -2.1
PTCD3-209ENST00000472044 MLF1P58340 268 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 TAS2R60P59551 318 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 RBX1P62877 108 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 FLI1Q01543 452 aaPredicted RBP1.94□□□□□ -2.1
PTCD3-209ENST00000472044 FAM53BQ14153 422 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 WDR43Q15061 677 aaKnown RBP eCLIP1.94□□□□□ -2.1
PTCD3-209ENST00000472044 MAPRE2Q15555 327 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 ATP6V1FQ16864 119 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 HSP90AA4PQ58FG1 418 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 HHATQ5VTY9 493 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 FAM104BQ5XKR9 115 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 C16orf87Q6PH81 154 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 Q96MT0 163 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 ZNF649Q9BS31 505 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 DHX35Q9H5Z1 703 aaKnown RBP1.94□□□□□ -2.1
PTCD3-209ENST00000472044 LZTFL1Q9NQ48 299 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 CA10Q9NS85 328 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 TMEM100Q9NV29 134 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 PPIL1Q9Y3C6 166 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 KPTNQ9Y664 436 aa1.94□□□□□ -2.1
PTCD3-209ENST00000472044 MIA3Q5JRA6 1907 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 LOC102724200A0A096LPH7 203 aaPredicted RBP1.93□□□□□ -2.1
PTCD3-209ENST00000472044 ANKRD20A5PA0PJZ0 165 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 GOLGA6L4A6NEF3 574 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 VGLL3A8MV65 326 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 H0YC42 278 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 H7C2Y5 167 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 IGLV7-43P04211 117 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 OR5AL1P0C617 328 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 GALR1P47211 349 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 LINC00303Q3SY05 128 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 ZFAND6Q6FIF0 208 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 TBPL2Q6SJ96 375 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 ARHGAP18Q8N392 663 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 CYB561A3Q8NBI2 242 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 OR1P1Q8NH06 330 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 MS4A8Q9BY19 250 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 TBL1XR1Q9BZK7 514 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 LHX5Q9H2C1 402 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 GAL3ST2Q9H3Q3 398 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 C6orf50Q9HD87 102 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 HMGXB4Q9UGU5 601 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 SLC7A11Q9UPY5 501 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 TNIKQ9UKE5 1360 aa1.93□□□□□ -2.1
PTCD3-209ENST00000472044 SETD1AO15047 1707 aaKnown RBP1.92□□□□□ -2.1
PTCD3-209ENST00000472044 A0A0G2JMP0 313 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 A0A0X1KG70 313 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 GSTTP1A0A1W2PQM5 241 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 ZNF233A6NK53 670 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 UPK1AO00322 258 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 FSTL3O95633 263 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 IGHV1-46P01743 117 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 STAG3L2P0CL84 134 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 PAX6P26367 422 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 TGM4P49221 684 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 RPS11P62280 158 aaKnown RBP eCLIP1.92□□□□□ -2.1
PTCD3-209ENST00000472044 RPL31P62899 125 aaKnown RBP1.92□□□□□ -2.1
PTCD3-209ENST00000472044 GRB2P62993 217 aaKnown RBP1.92□□□□□ -2.1
PTCD3-209ENST00000472044 ADIGQ0VDE8 80 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 IL15RAQ13261 267 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 TOMM34Q15785 309 aaPredicted RBP1.92□□□□□ -2.1
PTCD3-209ENST00000472044 CDNFQ49AH0 187 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 ZNF678Q5SXM1 525 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
PTCD3-209ENST00000472044 EPGNQ6UW88 154 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms