RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 PRSS44E7EML9 344 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 PIN1P1O15428 100 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 SSX4O60224 188 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 CRYAAP02489 173 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 ISG15P05161 165 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 BTF3P20290 206 aaKnown RBP4.04□□□□□ -1.76
SF3B1-208ENST00000470268 CCL1P22362 96 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 GCSHP23434 173 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 MPV17P39210 176 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 TAS2R43P59537 309 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 FAM3AP98173 230 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 MRPL28Q13084 256 aaKnown RBP4.04□□□□□ -1.76
SF3B1-208ENST00000470268 HNRNPA0Q13151 305 aaKnown RBP4.04□□□□□ -1.76
SF3B1-208ENST00000470268 GPR50Q13585 617 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 ALKBH6Q3KRA9 238 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 DMRTC1Q5HYR2 192 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 BCL2L15Q5TBC7 163 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 CD200R1LQ6Q8B3 271 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 TMEM108Q6UXF1 575 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 Q6ZNX1 250 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 Q6ZSR3 168 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 LRP11Q86VZ4 500 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 LAX1Q8IWV1 398 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 ZNF676Q8N7Q3 588 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 NKAIN3Q8N8D7 197 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 KBTBD8Q8NFY9 601 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 OR52H1Q8NGJ2 320 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 OR1J1Q8NGS3 322 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 OR5AK2Q8NH90 309 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 SLC25A40Q8TBP6 338 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 TMEM171Q8WVE6 324 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 UFD1Q92890 307 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 APOBEC3DQ96AK3 386 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-208ENST00000470268 LRRC46Q96FV0 321 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 MARS2Q96GW9 593 aaKnown RBP4.04□□□□□ -1.76
SF3B1-208ENST00000470268 REEP6Q96HR9 211 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 RADILQ96JH8 1075 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 FAM71F1Q96KD3 344 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-208ENST00000470268 MOB1AQ9H8S9 216 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 CDH20Q9HBT6 801 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 GPR84Q9NQS5 396 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 FZR1Q9UM11 496 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 KLF2Q9Y5W3 355 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-208ENST00000470268 TENM4Q6N022 2769 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 HCFC1P51610 2035 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 DOPEY1Q5JWR5 2465 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 A0A087WWL8 130 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 TRBV5-5A0A0J9YX44 114 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 hCG_38984A0A1B0GV85 526 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 ACOD1A6NK06 481 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 ZNF785A8K8V0 405 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 CLDN25C9JDP6 229 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 SYT7O43581 403 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 APOC1P02654 83 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 UBCP0CG48 685 aaKnown RBP4.03□□□□□ -1.76
SF3B1-208ENST00000470268 TNFSF4P23510 183 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 AZGP1P25311 298 aaKnown RBP4.03□□□□□ -1.76
SF3B1-208ENST00000470268 PSMA1P25786 263 aaKnown RBP4.03□□□□□ -1.76
SF3B1-208ENST00000470268 GABRA5P31644 462 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 THBS4P35443 961 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 SOX2P48431 317 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 FABP6P51161 128 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 OR10A3P58181 314 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 PPP1CBP62140 327 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 PSG7Q13046 419 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 SNTB2Q13425 540 aaKnown RBP4.03□□□□□ -1.76
SF3B1-208ENST00000470268 OR8B8Q15620 311 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 ACSM3Q53FZ2 586 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 YIF1BQ5BJH7 314 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 SLC22A25Q6T423 547 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 FBXW12Q6X9E4 464 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 MEX3BQ6ZN04 569 aaKnown RBP4.03□□□□□ -1.76
SF3B1-208ENST00000470268 Q6ZSN1 163 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 SSX8Q7RTT4 187 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 PARP16Q8N5Y8 322 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 RNF152Q8N8N0 203 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 OR1J2Q8NGS2 313 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 KLF14Q8TD94 323 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-208ENST00000470268 HAVCR2Q8TDQ0 301 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 BORCS5Q969J3 196 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 ADAT3Q96EY9 351 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-208ENST00000470268 PIK3IP1Q96FE7 263 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 SDHCQ99643 169 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-208ENST00000470268 NKX3-1Q99801 234 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-208ENST00000470268 TMEM204Q9BSN7 226 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 TINAGL1Q9GZM7 467 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-208ENST00000470268 NXF2Q9GZY0 626 aaKnown RBP4.03□□□□□ -1.76
SF3B1-208ENST00000470268 MOV10Q9HCE1 1003 aaKnown RBP4.03□□□□□ -1.76
SF3B1-208ENST00000470268 CA10Q9NS85 328 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 PTTG3PQ9NZH4 202 aa4.03□□□□□ -1.76
SF3B1-208ENST00000470268 MYEF2Q9P2K5 600 aaKnown RBP4.03□□□□□ -1.76
SF3B1-208ENST00000470268 PLEKHB1Q9UF11 243 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-208ENST00000470268 TRAV8-7A0A075B6U6 113 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 E7EQL1 145 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 GABRPO00591 440 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 RGS5O15539 181 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 XRCC2O43543 280 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 B3GALNT1O75752 331 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 DHRS3O75911 302 aa4.02□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF250P15622 560 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms