RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 MRPS26Q9BYN8 205 aaKnown RBP12.46□□□□□ -0.41
COL9A3-209ENST00000469852 METTL17Q9H7H0 456 aaPredicted RBP12.46□□□□□ -0.41
COL9A3-209ENST00000469852 MED13LQ71F56 2210 aa12.46□□□□□ -0.42
COL9A3-209ENST00000469852 ITPR3Q14573 2671 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 LRP5LA4QPB2 252 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 OR5B21A6NL26 309 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 A6NLC8 198 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 TMEM210A6NLX4 147 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 SYNGR1O43759 233 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 ZNF205O95201 554 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 SERPINA3P01011 423 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 TFAP2AP05549 437 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 UCHL1P09936 223 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 EGR1P18146 543 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 FSTP19883 344 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 FUT6P51993 359 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 MRPS11P82912 194 aaKnown RBP12.45□□□□□ -0.42
COL9A3-209ENST00000469852 RIN1Q13671 783 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 CD200R1LQ6Q8B3 271 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 WDR82Q6UXN9 313 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 SPNS3Q6ZMD2 512 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 OR52N4Q8NGI2 321 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 Q8TCH9 128 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 C10orf105Q8TEF2 133 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 RFT1Q96AA3 541 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 BORCS8Q96FH0 119 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 OR51E2Q9H255 320 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 FN3KRPQ9HA64 309 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 TMEM106BQ9NUM4 274 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 SLC7A11Q9UPY5 501 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 NF1P21359 2839 aa12.45□□□□□ -0.42
COL9A3-209ENST00000469852 TMEM178BH3BS89 294 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 GPX5O75715 221 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 CD36P16671 472 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 RAB3AP20336 220 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 GADD45AP24522 165 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 PSMA1P25786 263 aaKnown RBP12.44□□□□□ -0.42
COL9A3-209ENST00000469852 HAAOP46952 286 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 PDLIM4P50479 330 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 MZT1Q08AG7 82 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 TRAM1Q15629 374 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 HFEQ30201 348 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 AVPI1Q5T686 147 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 HAGHLQ6PII5 290 aaPredicted RBP12.44□□□□□ -0.42
COL9A3-209ENST00000469852 CLEC2AQ6UVW9 174 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 BATF2Q8N1L9 274 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 GCSAMQ8N6F7 178 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 C19orf18Q8NEA5 215 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 DNAAF1Q8NEP3 725 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 AQP3Q92482 292 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 FAM168AQ92567 244 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 SPSB1Q96BD6 273 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 YIPF6Q96EC8 236 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 SEH1LQ96EE3 360 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 Q96MF0 132 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 ZNF488Q96MN9 340 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 TECTBQ96PL2 329 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 CHODLQ9H9P2 273 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 VCX3AQ9NNX9 186 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 MYOZ1Q9NP98 299 aaPredicted RBP12.44□□□□□ -0.42
COL9A3-209ENST00000469852 DLL4Q9NR61 685 aa12.44□□□□□ -0.42
COL9A3-209ENST00000469852 TRDV1A0A1B0GX56 115 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 hCG_1807616A0A1W2PRN6 198 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 SHISA3A0PJX4 238 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 TRIM64BA6NI03 449 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 VWC2LB2RUY7 222 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 WNT9BO14905 357 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 ALX3O95076 343 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 PLATP00750 562 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 MAS1P04201 325 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 HCKP08631 526 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 ADRA2CP18825 462 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 PRKACBP22694 351 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 GIFP27352 417 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 MAPK3P27361 379 aaPredicted RBP12.43□□□□□ -0.42
COL9A3-209ENST00000469852 CD80P33681 288 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 ALDH3B2P48448 385 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 RBP2P50120 134 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 MTCP1P56278 107 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 PRSS57Q6UWY2 283 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 LRRTM1Q86UE6 522 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 OR5D18Q8NGL1 313 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 OR13F1Q8NGS4 319 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 LRRC29Q8WV35 223 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 ERGIC1Q969X5 290 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 BPESC1Q9GZL8 116 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 RNF167Q9H6Y7 350 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 STUB1Q9UNE7 303 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 FOXJ3Q9UPW0 622 aa12.43□□□□□ -0.42
COL9A3-209ENST00000469852 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.42□□□□□ -0.42
COL9A3-209ENST00000469852 J3QT63 122 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 PPIHO43447 177 aaKnown RBP12.42□□□□□ -0.42
COL9A3-209ENST00000469852 AKR7A2O43488 359 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 SPRY1O43609 319 aaPredicted RBP12.42□□□□□ -0.42
COL9A3-209ENST00000469852 LHBP01229 141 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 MPZP25189 248 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 BDKRB2P30411 391 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 ATP1B3P54709 279 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 GMFBP60983 142 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 PPP3R1P63098 170 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms