RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 FREM1Q5H8C1 2179 aa5.29□□□□□ -1.56
PTCD3-208ENST00000469585 HEATR1Q9H583 2144 aaKnown RBP5.29□□□□□ -1.56
PTCD3-208ENST00000469585 ANKRD17O75179 2603 aaKnown RBP5.28□□□□□ -1.56
PTCD3-208ENST00000469585 NOTCH2Q04721 2471 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 LOC390937A0A1W2PQ73 354 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 IRGMA1A4Y4 181 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 GGT3PA6NGU5 568 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 LRRC30A6NM36 301 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF670-ZNF695F2Z2N8 137 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 M0R135 149 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 RER1O15258 196 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 XRCC2O43543 280 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 TLX2O43763 284 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-208ENST00000469585 LYNP07948 512 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 SOD3P08294 240 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 RPSAP08865 295 aaKnown RBP5.28□□□□□ -1.56
PTCD3-208ENST00000469585 ADRA2AP08913 450 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 DANCRP0C864 163 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 OCM2P0CE71 109 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 OCMP0CE72 109 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-208ENST00000469585 CCL2P13500 99 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF35P13682 527 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 TMEM11P17152 192 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 SPI1P17947 270 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 PCMT1P22061 227 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 BDKRB2P30411 391 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 CALCRP30988 508 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 PYCR1P32322 319 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 SRP9P49458 86 aaKnown RBP5.28□□□□□ -1.56
PTCD3-208ENST00000469585 CAMPP49913 170 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 ALDH3A2P51648 485 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 SEC61A1P61619 476 aaKnown RBP5.28□□□□□ -1.56
PTCD3-208ENST00000469585 APOFQ13790 326 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 PTGES3Q15185 160 aaKnown RBP5.28□□□□□ -1.56
PTCD3-208ENST00000469585 CTF1Q16619 201 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 HFEQ30201 348 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 MEDAGQ5VYS4 303 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 WDR73Q6P4I2 378 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 FAHD1Q6P587 224 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 DRAM2Q6UX65 266 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 FOXL2NBQ6ZUU3 175 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 PGAP1Q75T13 922 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 DCXRQ7Z4W1 244 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 TGIF2LYQ8IUE0 185 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 LINC00346Q8IVM7 164 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 C1orf87Q8N0U7 546 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 SLC26A10Q8NG04 563 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 OR52H1Q8NGJ2 320 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 OR8J1Q8NGP2 316 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 FAM81AQ8TBF8 368 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 TRUB1Q8WWH5 349 aaKnown RBP5.28□□□□□ -1.56
PTCD3-208ENST00000469585 PTP4A1Q93096 173 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 NABP1Q96AH0 204 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF799Q96GE5 643 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 TSSK2Q96PF2 358 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 GPA33Q99795 319 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 CIB1Q99828 191 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 SRSF8Q9BRL6 282 aaKnown RBP5.28□□□□□ -1.56
PTCD3-208ENST00000469585 YIPF3Q9GZM5 350 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 GABARAPL1Q9H0R8 117 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 WNT5BQ9H1J7 359 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 LIME1Q9H400 295 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 WDR76Q9H967 626 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 SLC25A19Q9HC21 320 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 S100A14Q9HCY8 104 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 ABCB9Q9NP78 766 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF701Q9NV72 531 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-208ENST00000469585 CHCHD3Q9NX63 227 aaKnown RBP5.28□□□□□ -1.56
PTCD3-208ENST00000469585 OR14J1Q9UGF5 321 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 WARS2Q9UGM6 360 aaKnown RBP5.28□□□□□ -1.56
PTCD3-208ENST00000469585 ZNF391Q9UJN7 358 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 IKZF2Q9UKS7 526 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 UGT2A1Q9Y4X1 527 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 GMPPBQ9Y5P6 360 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 CREBBPQ92793 2442 aa5.28□□□□□ -1.56
PTCD3-208ENST00000469585 UNC79Q9P2D8 2635 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 IGLV1-36A0A0B4J1U3 117 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 ERICH4A6NGS2 130 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 TVP23AA6NH52 213 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 FAM183AA6NL82 134 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 ANXA2P2A6NMY6 339 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 ANKRD30BLA7E2S9 258 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 CLDN25C9JDP6 229 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 M0QZ24 198 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 EI24O14681 340 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 DSCAMO60469 2012 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 MTRF1O75570 445 aaKnown RBP5.27□□□□□ -1.57
PTCD3-208ENST00000469585 KRT8P05787 483 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 GYPBP06028 91 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 MMP7P09237 267 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-208ENST00000469585 TACSTD2P09758 323 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 DAOP14920 347 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 ANPEPP15144 967 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 PAX1P15863 534 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 HNF1AP20823 631 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 LOXP28300 417 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-208ENST00000469585 RIDAP52758 137 aaKnown RBP5.27□□□□□ -1.57
PTCD3-208ENST00000469585 KRTAP10-11P60412 298 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 ACTC1P68032 377 aa5.27□□□□□ -1.57
PTCD3-208ENST00000469585 ACTA1P68133 377 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms