RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 TPRA1Q86W33 373 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 DNAAF1Q8NEP3 725 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 OR51A2Q8NGJ7 313 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 ITLN1Q8WWA0 313 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 NEU4Q8WWR8 484 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-216ENST00000468949 OR5P3Q8WZ94 311 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 GTF3AQ92664 365 aaKnown RBP6.91□□□□□ -1.3
HDAC6-216ENST00000468949 RFT1Q96AA3 541 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 ISOC1Q96CN7 298 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 ORAI1Q96D31 301 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 MEGF10Q96KG7 1140 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 SORCS2Q96PQ0 1159 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 CENPOQ9BU64 300 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 IL19Q9UHD0 177 aa6.91□□□□□ -1.3
HDAC6-216ENST00000468949 DCHS2Q6V1P9 2916 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 IGHV3-64DA0A0J9YX35 117 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 A0A1W2PPR1 153 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 PQLC2LA1A4F0 135 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 H0YL77 283 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 H7C417 338 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 J3QT63 122 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 ALX3O95076 343 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 AVPP01185 164 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 DANCRP0C864 163 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 TMEM225BP0DP42 221 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 IGFBP3P17936 291 aaPredicted RBP6.9□□□□□ -1.3
HDAC6-216ENST00000468949 DNASE1P24855 282 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 SDC2P34741 201 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 CDKN1AP38936 164 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 CD200P41217 278 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 CAPZA1P52907 286 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 KISS1Q15726 138 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 RAB11BQ15907 218 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 CARTPTQ16568 116 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 HFEQ30201 348 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 TMEM255AQ5JRV8 349 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 PRAMEF6Q5VXH4 476 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 HAGHLQ6PII5 290 aaPredicted RBP6.9□□□□□ -1.3
HDAC6-216ENST00000468949 FIP1L1Q6UN15 594 aaKnown RBP6.9□□□□□ -1.3
HDAC6-216ENST00000468949 Q6ZR03 302 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 MOGAT3Q86VF5 341 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 LURAP1LQ8IV03 231 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 CROCCP3Q8IVE0 287 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 MKXQ8IYA7 352 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 C1orf87Q8N0U7 546 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 CELF2-AS1Q8N7Q2 184 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 OR52N4Q8NGI2 321 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 OR5D18Q8NGL1 313 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 OR6M1Q8NGM8 313 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 ZNF671Q8TAW3 534 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 TNFAIP8L1Q8WVP5 186 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 HPSE2Q8WWQ2 592 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 AP3S1Q92572 193 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 NINJ1Q92982 152 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 ERGIC1Q969X5 290 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 SPACA5Q96QH8 159 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 UQCC2Q9BRT2 126 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 NAA50Q9GZZ1 169 aaKnown RBP6.9□□□□□ -1.3
HDAC6-216ENST00000468949 DCSTAMPQ9H295 470 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 METTL17Q9H7H0 456 aaPredicted RBP6.9□□□□□ -1.3
HDAC6-216ENST00000468949 PLEKHF2Q9H8W4 249 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 BARX1Q9HBU1 254 aaPredicted RBP6.9□□□□□ -1.3
HDAC6-216ENST00000468949 SMURF1Q9HCE7 757 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 PCDHB16Q9NRJ7 776 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 UFSP2Q9NUQ7 469 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 PPP1R3CQ9UQK1 317 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 AK6Q9Y3D8 172 aaKnown RBP6.9□□□□□ -1.3
HDAC6-216ENST00000468949 V9GY05 133 aa6.9□□□□□ -1.3
HDAC6-216ENST00000468949 HEATR1Q9H583 2144 aaKnown RBP6.89□□□□□ -1.31
HDAC6-216ENST00000468949 IGKV1-9A0A0C4DH69 117 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 IGHV1-69-2A0A0G2JMI3 117 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 SMIM30A4D0T7 59 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 DPPA5A6NC42 116 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 TRIM64BA6NI03 449 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 NOTOA8MTQ0 251 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 TRAPPC2LH3BP13 241 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 IFNL4K9M1U5 179 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 ZNF701M0R085 212 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-216ENST00000468949 PIN1P1O15428 100 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 KDM4BO94953 1096 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 IL1AP01583 271 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 CSTBP04080 98 aaKnown RBP6.89□□□□□ -1.31
HDAC6-216ENST00000468949 ALDOBP05062 364 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 CD55P08174 381 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 ADH4P08319 380 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 HTR2CP28335 458 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 THBS2P35442 1172 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 ZNF154Q13106 437 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 HNRNPA0Q13151 305 aaKnown RBP6.89□□□□□ -1.31
HDAC6-216ENST00000468949 RSU1Q15404 277 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 MST1LQ2TV78 715 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 C11orf71Q6IPW1 123 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 SLC16A12Q6ZSM3 486 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 SLC25A26Q70HW3 274 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 PEG10Q86TG7 708 aaKnown RBP6.89□□□□□ -1.31
HDAC6-216ENST00000468949 CDH26Q8IXH8 852 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 Q8IYB0 196 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 BOLLQ8N9W6 283 aaKnown RBP6.89□□□□□ -1.31
HDAC6-216ENST00000468949 NDNFQ8TB73 568 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 C12orf43Q96C57 262 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms