RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 HAGHLQ6PII5 290 aaPredicted RBP12.85□□□□□ -0.35
SNIP1-202ENST00000468040 C1orf87Q8N0U7 546 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 CCL17Q92583 94 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 CHCHD6Q9BRQ6 235 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 PKIBQ9C010 78 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 OR51E2Q9H255 320 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 PPIL3Q9H2H8 161 aaKnown RBP12.85□□□□□ -0.35
SNIP1-202ENST00000468040 CHODLQ9H9P2 273 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 SNTG1Q9NSN8 517 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 TMEM106BQ9NUM4 274 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 UFSP2Q9NUQ7 469 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 TXNL4BQ9NX01 149 aaKnown RBP12.85□□□□□ -0.35
SNIP1-202ENST00000468040 POLDIP2Q9Y2S7 368 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 APCP25054 2843 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 ABCA12Q86UK0 2595 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 SPG11Q96JI7 2443 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 USF3Q68DE3 2245 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 LOC100506127A0A0U1RQW1 187 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 hCG_1807616A0A1W2PRN6 198 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 AIREO43918 545 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 RP2O75695 350 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 MAS1P04201 325 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 PDLIM4P50479 330 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 DSCR9P59020 149 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 KISS1Q15726 138 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 DDI2Q5TDH0 399 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 CLEC2AQ6UVW9 174 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 CDH26Q8IXH8 852 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 SCCPDHQ8NBX0 429 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 OR52N4Q8NGI2 321 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 RPL3LQ92901 407 aaKnown RBP12.84□□□□□ -0.35
SNIP1-202ENST00000468040 YIPF5Q969M3 257 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 TMIGD2Q96BF3 282 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 KCTD7Q96MP8 289 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 FOXC2Q99958 501 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 FUNDC2Q9BWH2 189 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 C1orf123Q9NWV4 160 aa12.84□□□□□ -0.35
SNIP1-202ENST00000468040 IGKV1-27A0A075B6S5 117 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 TRAV1-2A0A0B4J238 106 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 CLDN25C9JDP6 229 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 NDUFS8O00217 210 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 CDIPTO14735 213 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 CYB5AP00167 134 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 COL8A2P25067 703 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 MPZP25189 248 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 ZNF93P35789 620 aaPredicted RBP12.83□□□□□ -0.36
SNIP1-202ENST00000468040 CFHR2P36980 270 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 TMEM33P57088 247 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 IL24Q13007 206 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 CARTPTQ16568 116 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 PRSS57Q6UWY2 283 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 WDR82Q6UXN9 313 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 PEG10Q86TG7 708 aaKnown RBP12.83□□□□□ -0.36
SNIP1-202ENST00000468040 LRRTM1Q86UE6 522 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 SATL1Q86VE3 508 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 C11orf53Q8IXP5 236 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 ZNF525Q8N782 197 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 PNLDC1Q8NA58 520 aaKnown RBP12.83□□□□□ -0.36
SNIP1-202ENST00000468040 OR10Z1Q8NGY1 313 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 ZNF420Q8TAQ5 688 aaPredicted RBP12.83□□□□□ -0.36
SNIP1-202ENST00000468040 ZNF671Q8TAW3 534 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 AQP3Q92482 292 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 GPER1Q99527 375 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 METTL17Q9H7H0 456 aaPredicted RBP12.83□□□□□ -0.36
SNIP1-202ENST00000468040 TREM2Q9NZC2 230 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 RNF7Q9UBF6 113 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 CACNG2Q9Y698 323 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 TANC2Q9HCD6 1990 aa12.83□□□□□ -0.36
SNIP1-202ENST00000468040 LYNX1G3V0Z9 82 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 PDCD5O14737 125 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 LYNX1P0DP58 116 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 PMELP40967 661 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 MTNR1BP49286 362 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 PSMD7P51665 324 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 SHEQ5VZ18 495 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 GLT8D1Q68CQ7 371 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 ZNF826PQ6ZT77 177 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 ANGPTL5Q86XS5 388 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 ANKRD13BQ86YJ7 626 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 CALHM1Q8IU99 346 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 MKXQ8IYA7 352 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 JAGN1Q8N5M9 183 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 ZSCAN4Q8NAM6 433 aaPredicted RBP12.82□□□□□ -0.36
SNIP1-202ENST00000468040 LRRC29Q8WV35 223 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 FAM168AQ92567 244 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 FOXRED1Q96CU9 486 aaPredicted RBP12.82□□□□□ -0.36
SNIP1-202ENST00000468040 TIMD4Q96H15 378 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 SPACA5Q96QH8 159 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 UQCC2Q9BRT2 126 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 NPTNQ9Y639 398 aa12.82□□□□□ -0.36
SNIP1-202ENST00000468040 ANKRD17O75179 2603 aaKnown RBP12.81□□□□□ -0.36
SNIP1-202ENST00000468040 TMEM178BH3BS89 294 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 CYB5R3P00387 301 aaPredicted RBP12.81□□□□□ -0.36
SNIP1-202ENST00000468040 PLATP00750 562 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 ACAA1P09110 424 aaPredicted RBP12.81□□□□□ -0.36
SNIP1-202ENST00000468040 ADRA2CP18825 462 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 GIFP27352 417 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 POU3F4P49335 361 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 PDZK1IP1Q13113 114 aa12.81□□□□□ -0.36
SNIP1-202ENST00000468040 CLEC12BQ2HXU8 276 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms